Protein–RNA interactions for Protein: P0CX60

TY1A-PR2, Transposon Ty1-PR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR2P0CX60 AAD6YFL056C 639 nt8.19□□□□□ -1.1
TY1A-PR2P0CX60 SPO7YAL009W 780 nt8.19□□□□□ -1.1
TY1A-PR2P0CX60 RCN1YKL159C 636 nt8.19□□□□□ -1.1
TY1A-PR2P0CX60 NTG2YOL043C 1143 nt8.19□□□□□ -1.1
TY1A-PR2P0CX60 DBP1YPL119C 1854 nt8.19□□□□□ -1.1
TY1A-PR2P0CX60 PMT2YAL023C 2280 nt8.18□□□□□ -1.1
TY1A-PR2P0CX60 GPM2YDL021W 936 nt8.18□□□□□ -1.1
TY1A-PR2P0CX60 NSE4YDL105W 1209 nt8.18□□□□□ -1.1
TY1A-PR2P0CX60 AIR2YDL175C 1035 nt8.18□□□□□ -1.1
TY1A-PR2P0CX60 YHL009W-AYHL009W-A 1242 nt8.18□□□□□ -1.1
TY1A-PR2P0CX60 NIT1YIL164C 600 nt8.18□□□□□ -1.1
TY1A-PR2P0CX60 YJL195CYJL195C 702 nt8.18□□□□□ -1.1
TY1A-PR2P0CX60 AIM25YJR100C 984 nt8.18□□□□□ -1.1
TY1A-PR2P0CX60 YKL123WYKL123W 381 nt8.18□□□□□ -1.1
TY1A-PR2P0CX60 MIA40YKL195W 1212 nt8.18□□□□□ -1.1
TY1A-PR2P0CX60 YKR045CYKR045C 552 nt8.18□□□□□ -1.1
TY1A-PR2P0CX60 OPI10YOL032W 741 nt8.18□□□□□ -1.1
TY1A-PR2P0CX60 MPD2YOL088C 834 nt8.18□□□□□ -1.1
TY1A-PR2P0CX60 APA1YCL050C 966 nt8.18□□□□□ -1.1
TY1A-PR2P0CX60 KES1YPL145C 1305 nt8.18□□□□□ -1.1
TY1A-PR2P0CX60 GID7YCL039W 2238 nt8.18□□□□□ -1.1
TY1A-PR2P0CX60 SLS1YLR139C 1932 nt8.17□□□□□ -1.1
TY1A-PR2P0CX60 TGL2YDR058C 981 nt8.17□□□□□ -1.1
TY1A-PR2P0CX60 UPS3YDR185C 540 nt8.17□□□□□ -1.1
TY1A-PR2P0CX60 SPT3YDR392W 1014 nt8.17□□□□□ -1.1
TY1A-PR2P0CX60 STS1YIR011C 960 nt8.17□□□□□ -1.1
TY1A-PR2P0CX60 MBR1YKL093W 1020 nt8.17□□□□□ -1.1
TY1A-PR2P0CX60 SPE4YLR146C 903 nt8.17□□□□□ -1.1
TY1A-PR2P0CX60 NCE103YNL036W 666 nt8.17□□□□□ -1.1
TY1A-PR2P0CX60 MIC27YNL100W 705 nt8.17□□□□□ -1.1
TY1A-PR2P0CX60 CPR8YNR028W 927 nt8.17□□□□□ -1.1
TY1A-PR2P0CX60 CSI2YOL007C 1026 nt8.17□□□□□ -1.1
TY1A-PR2P0CX60 HNT3YOR258W 654 nt8.17□□□□□ -1.1
TY1A-PR2P0CX60 YPR071WYPR071W 636 nt8.17□□□□□ -1.1
TY1A-PR2P0CX60 GTB1YDR221W 2109 nt8.17□□□□□ -1.1
TY1A-PR2P0CX60 QRI7YDL104C 1224 nt8.16□□□□□ -1.1
TY1A-PR2P0CX60 EFM3YJR129C 1020 nt8.16□□□□□ -1.1
TY1A-PR2P0CX60 RIT1YMR283C 1542 nt8.16□□□□□ -1.1
TY1A-PR2P0CX60 YPK3YBR028C 1578 nt8.16□□□□□ -1.1
TY1A-PR2P0CX60 MED8YBR193C 672 nt8.16□□□□□ -1.1
TY1A-PR2P0CX60 SAD1YFR005C 1347 nt8.15□□□□□ -1.1
TY1A-PR2P0CX60 OSH7YHR001W 1314 nt8.15□□□□□ -1.1
TY1A-PR2P0CX60 YEL028WYEL028W 462 nt8.15□□□□□ -1.1
TY1A-PR2P0CX60 TFG2YGR005C 1203 nt8.15□□□□□ -1.1
TY1A-PR2P0CX60 SHY1YGR112W 1170 nt8.15□□□□□ -1.1
TY1A-PR2P0CX60 ATP20YPR020W 348 nt8.15□□□□□ -1.1
TY1A-PR2P0CX60 RPL21AYBR191W 483 nt8.15□□□□□ -1.1
TY1A-PR2P0CX60 YCL041CYCL041C 495 nt8.15□□□□□ -1.1
TY1A-PR2P0CX60 YHR218WYHR218W 1812 nt8.15□□□□□ -1.11
TY1A-PR2P0CX60 DMA2YNL116W 1569 nt8.14□□□□□ -1.11
TY1A-PR2P0CX60 ENP1YBR247C 1452 nt8.14□□□□□ -1.11
TY1A-PR2P0CX60 CTF13YMR094W 1437 nt8.14□□□□□ -1.11
TY1A-PR2P0CX60 HOS1YPR068C 1413 nt8.14□□□□□ -1.11
TY1A-PR2P0CX60 NOB1YOR056C 1380 nt8.14□□□□□ -1.11
TY1A-PR2P0CX60 SRO9YCL037C 1305 nt8.14□□□□□ -1.11
TY1A-PR2P0CX60 tM(CAU)CtM(CAU)C 72 nt8.14□□□□□ -1.11
TY1A-PR2P0CX60 IMT4tM(CAU)E 72 nt8.14□□□□□ -1.11
TY1A-PR2P0CX60 IMT3tM(CAU)J3 72 nt8.14□□□□□ -1.11
TY1A-PR2P0CX60 IMT1tM(CAU)O1 72 nt8.14□□□□□ -1.11
TY1A-PR2P0CX60 IMT2tM(CAU)P 72 nt8.14□□□□□ -1.11
TY1A-PR2P0CX60 MND2YIR025W 1107 nt8.14□□□□□ -1.11
TY1A-PR2P0CX60 YLR156WYLR156W 345 nt8.14□□□□□ -1.11
TY1A-PR2P0CX60 YLR157W-DYLR157W-D 213 nt8.14□□□□□ -1.11
TY1A-PR2P0CX60 YLR159WYLR159W 345 nt8.14□□□□□ -1.11
TY1A-PR2P0CX60 YLR161WYLR161W 345 nt8.14□□□□□ -1.11
TY1A-PR2P0CX60 CPR6YLR216C 1116 nt8.14□□□□□ -1.11
TY1A-PR2P0CX60 YML099W-AYML099W-A 330 nt8.14□□□□□ -1.11
TY1A-PR2P0CX60 TAF3YPL011C 1062 nt8.14□□□□□ -1.11
TY1A-PR2P0CX60 CIN2YPL241C 807 nt8.14□□□□□ -1.11
TY1A-PR2P0CX60 GAP1YKR039W 1809 nt8.14□□□□□ -1.11
TY1A-PR2P0CX60 CCT2YIL142W 1584 nt8.14□□□□□ -1.11
TY1A-PR2P0CX60 AVT2YEL064C 1443 nt8.13□□□□□ -1.11
TY1A-PR2P0CX60 YDL162CYDL162C 357 nt8.13□□□□□ -1.11
TY1A-PR2P0CX60 COBQ0105 1158 nt8.13□□□□□ -1.11
TY1A-PR2P0CX60 YIL082WYIL082W 873 nt8.13□□□□□ -1.11
TY1A-PR2P0CX60 TFA2YKR062W 987 nt8.13□□□□□ -1.11
TY1A-PR2P0CX60 SMD3YLR147C 306 nt8.13□□□□□ -1.11
TY1A-PR2P0CX60 YLR235CYLR235C 399 nt8.13□□□□□ -1.11
TY1A-PR2P0CX60 IMD1YAR073W 1212 nt8.13□□□□□ -1.11
TY1A-PR2P0CX60 ELC1YPL046C 300 nt8.13□□□□□ -1.11
TY1A-PR2P0CX60 MRL1YPR079W 1146 nt8.13□□□□□ -1.11
TY1A-PR2P0CX60 BET2YPR176C 978 nt8.13□□□□□ -1.11
TY1A-PR2P0CX60 AAC3YBR085W 924 nt8.13□□□□□ -1.11
TY1A-PR2P0CX60 ELP3YPL086C 1674 nt8.13□□□□□ -1.11
TY1A-PR2P0CX60 LAS1YKR063C 1509 nt8.13□□□□□ -1.11
TY1A-PR2P0CX60 ERV14YGL054C 417 nt8.12□□□□□ -1.11
TY1A-PR2P0CX60 YGR114CYGR114C 390 nt8.12□□□□□ -1.11
TY1A-PR2P0CX60 ARD1YHR013C 717 nt8.12□□□□□ -1.11
TY1A-PR2P0CX60 YBL062WYBL062W 381 nt8.12□□□□□ -1.11
TY1A-PR2P0CX60 CKB2YOR039W 777 nt8.12□□□□□ -1.11
TY1A-PR2P0CX60 FIG1YBR040W 897 nt8.12□□□□□ -1.11
TY1A-PR2P0CX60 YBR063CYBR063C 1215 nt8.12□□□□□ -1.11
TY1A-PR2P0CX60 HMLALPHA2YCL067C 633 nt8.11□□□□□ -1.11
TY1A-PR2P0CX60 MATALPHA2YCR039C 633 nt8.11□□□□□ -1.11
TY1A-PR2P0CX60 YHR214C-DYHR214C-D 294 nt8.11□□□□□ -1.11
TY1A-PR2P0CX60 CKA1YIL035C 1119 nt8.11□□□□□ -1.11
TY1A-PR2P0CX60 CBT1YKL208W 816 nt8.11□□□□□ -1.11
TY1A-PR2P0CX60 YAR069CYAR069C 294 nt8.11□□□□□ -1.11
TY1A-PR2P0CX60 NBP1YLR457C 960 nt8.11□□□□□ -1.11
TY1A-PR2P0CX60 AIM34YMR003W 597 nt8.11□□□□□ -1.11
Retrieved 100 of 7,029 protein–RNA pairs in 36 ms