Protein–RNA interactions for Protein: P0CH08

RPL40A, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40AP0CH08 HVG1YER039C 750 nt6.38□□□□□ -1.39
RPL40AP0CH08 tX(XXX)DtX(XXX)D 100 nt6.38□□□□□ -1.39
RPL40AP0CH08 ERV25YML012W 636 nt6.38□□□□□ -1.39
RPL40AP0CH08 SPG5YMR191W 1122 nt6.38□□□□□ -1.39
RPL40AP0CH08 ENV7YPL236C 1095 nt6.38□□□□□ -1.39
RPL40AP0CH08 YDR215CYDR215C 414 nt6.37□□□□□ -1.39
RPL40AP0CH08 YDR327WYDR327W 327 nt6.37□□□□□ -1.39
RPL40AP0CH08 YAH1YPL252C 519 nt6.37□□□□□ -1.39
RPL40AP0CH08 YHL018WYHL018W 363 nt6.36□□□□□ -1.39
RPL40AP0CH08 YLR112WYLR112W 420 nt6.36□□□□□ -1.39
RPL40AP0CH08 ICL2YPR006C 1728 nt6.36□□□□□ -1.39
RPL40AP0CH08 NUP57YGR119C 1626 nt6.36□□□□□ -1.39
RPL40AP0CH08 YEL023CYEL023C 2049 nt6.35□□□□□ -1.39
RPL40AP0CH08 YGL260WYGL260W 231 nt6.35□□□□□ -1.39
RPL40AP0CH08 EDC3YEL015W 1656 nt6.35□□□□□ -1.39
RPL40AP0CH08 GNP1YDR508C 1992 nt6.35□□□□□ -1.39
RPL40AP0CH08 HHY1YEL059W 309 nt6.34□□□□□ -1.39
RPL40AP0CH08 MEU1YLR017W 1014 nt6.34□□□□□ -1.39
RPL40AP0CH08 RNH1YMR234W 1047 nt6.34□□□□□ -1.39
RPL40AP0CH08 LIP5YOR196C 1245 nt6.34□□□□□ -1.39
RPL40AP0CH08 KIN1YDR122W 3195 nt6.33□□□□□ -1.4
RPL40AP0CH08 MSC3YLR219W 2187 nt6.33□□□□□ -1.4
RPL40AP0CH08 MPC2YHR162W 390 nt6.33□□□□□ -1.4
RPL40AP0CH08 ECM19YLR390W 339 nt6.33□□□□□ -1.4
RPL40AP0CH08 ICP55YER078C 1536 nt6.33□□□□□ -1.4
RPL40AP0CH08 SEC23YPR181C 2307 nt6.33□□□□□ -1.4
RPL40AP0CH08 RQC1YDR333C 2172 nt6.33□□□□□ -1.4
RPL40AP0CH08 EFM1YHL039W 1758 nt6.32□□□□□ -1.4
RPL40AP0CH08 YGL102CYGL102C 429 nt6.32□□□□□ -1.4
RPL40AP0CH08 YLL058WYLL058W 1728 nt6.32□□□□□ -1.4
RPL40AP0CH08 RHB1YCR027C 630 nt6.31□□□□□ -1.4
RPL40AP0CH08 CDC19YAL038W 1503 nt6.3□□□□□ -1.4
RPL40AP0CH08 ERG1YGR175C 1491 nt6.29□□□□□ -1.4
RPL40AP0CH08 DAL3YIR032C 588 nt6.29□□□□□ -1.4
RPL40AP0CH08 LDB18YLL049W 540 nt6.29□□□□□ -1.4
RPL40AP0CH08 YNL017CYNL017C 339 nt6.29□□□□□ -1.4
RPL40AP0CH08 YOR342CYOR342C 960 nt6.29□□□□□ -1.4
RPL40AP0CH08 ERG24YNL280C 1317 nt6.28□□□□□ -1.4
RPL40AP0CH08 FRE5YOR384W 2085 nt6.28□□□□□ -1.4
RPL40AP0CH08 YMR279CYMR279C 1623 nt6.28□□□□□ -1.4
RPL40AP0CH08 EXG2YDR261C 1689 nt6.27□□□□□ -1.41
RPL40AP0CH08 BRL1YHR036W 1416 nt6.27□□□□□ -1.41
RPL40AP0CH08 YPR196WYPR196W 1413 nt6.27□□□□□ -1.41
RPL40AP0CH08 AFG3YER017C 2286 nt6.27□□□□□ -1.41
RPL40AP0CH08 PPH22YDL188C 1134 nt6.27□□□□□ -1.41
RPL40AP0CH08 DMC1YER179W 1005 nt6.27□□□□□ -1.41
RPL40AP0CH08 YLR126CYLR126C 756 nt6.27□□□□□ -1.41
RPL40AP0CH08 SEC13YLR208W 894 nt6.27□□□□□ -1.41
RPL40AP0CH08 NUP84YDL116W 2181 nt6.27□□□□□ -1.41
RPL40AP0CH08 RRN10YBL025W 438 nt6.26□□□□□ -1.41
RPL40AP0CH08 ERI1YPL096C-A 207 nt6.26□□□□□ -1.41
RPL40AP0CH08 PRI1YIR008C 1230 nt6.25□□□□□ -1.41
RPL40AP0CH08 VPS24YKL041W 675 nt6.25□□□□□ -1.41
RPL40AP0CH08 CYB2YML054C 1776 nt6.24□□□□□ -1.41
RPL40AP0CH08 SUF3tG(CCC)D 72 nt6.24□□□□□ -1.41
RPL40AP0CH08 BUD32YGR262C 786 nt6.24□□□□□ -1.41
RPL40AP0CH08 YHC3YJL059W 1227 nt6.24□□□□□ -1.41
RPL40AP0CH08 KSH1YNL024C-A 219 nt6.24□□□□□ -1.41
RPL40AP0CH08 HSP26YBR072W 645 nt6.24□□□□□ -1.41
RPL40AP0CH08 YFR034W-AYFR034W-A 288 nt6.23□□□□□ -1.41
RPL40AP0CH08 DLD1YDL174C 1764 nt6.23□□□□□ -1.41
RPL40AP0CH08 AGP2YBR132C 1791 nt6.23□□□□□ -1.41
RPL40AP0CH08 MCH2YKL221W 1422 nt6.23□□□□□ -1.41
RPL40AP0CH08 SFC1YJR095W 969 nt6.22□□□□□ -1.41
RPL40AP0CH08 YJR154WYJR154W 1041 nt6.22□□□□□ -1.41
RPL40AP0CH08 ASK1YKL052C 879 nt6.22□□□□□ -1.41
RPL40AP0CH08 SMK1YPR054W 1167 nt6.22□□□□□ -1.41
RPL40AP0CH08 SGF29YCL010C 780 nt6.22□□□□□ -1.41
RPL40AP0CH08 MTR3YGR158C 753 nt6.21□□□□□ -1.42
RPL40AP0CH08 NTG1YAL015C 1200 nt6.21□□□□□ -1.42
RPL40AP0CH08 YKL077WYKL077W 1179 nt6.21□□□□□ -1.42
RPL40AP0CH08 ARC35YNR035C 1029 nt6.21□□□□□ -1.42
RPL40AP0CH08 TSR3YOR006C 942 nt6.21□□□□□ -1.42
RPL40AP0CH08 MCM5YLR274W 2328 nt6.21□□□□□ -1.42
RPL40AP0CH08 YLL066CYLL066C 3618 nt6.2□□□□□ -1.42
RPL40AP0CH08 YLL067CYLL067C 3618 nt6.2□□□□□ -1.42
RPL40AP0CH08 RRP45YDR280W 918 nt6.2□□□□□ -1.42
RPL40AP0CH08 YHR213W-AYHR213W-A 234 nt6.2□□□□□ -1.42
RPL40AP0CH08 DOT5YIL010W 648 nt6.2□□□□□ -1.42
RPL40AP0CH08 SNT309YPR101W 528 nt6.2□□□□□ -1.42
RPL40AP0CH08 SMX3YPR182W 261 nt6.2□□□□□ -1.42
RPL40AP0CH08 HEM2YGL040C 1029 nt6.19□□□□□ -1.42
RPL40AP0CH08 RPR2YIR015W 435 nt6.19□□□□□ -1.42
RPL40AP0CH08 YKL018C-AYKL018C-A 300 nt6.19□□□□□ -1.42
RPL40AP0CH08 VMA16YHR026W 642 nt6.18□□□□□ -1.42
RPL40AP0CH08 PSR2YLR019W 1194 nt6.18□□□□□ -1.42
RPL40AP0CH08 SRL2YLR082C 1179 nt6.18□□□□□ -1.42
RPL40AP0CH08 YNR042WYNR042W 429 nt6.18□□□□□ -1.42
RPL40AP0CH08 VTS1YOR359W 1572 nt6.18□□□□□ -1.42
RPL40AP0CH08 SWD1YAR003W 1281 nt6.17□□□□□ -1.42
RPL40AP0CH08 MHP1YJL042W 4197 nt6.17□□□□□ -1.42
RPL40AP0CH08 ACO1YLR304C 2337 nt6.16□□□□□ -1.42
RPL40AP0CH08 TAH11YJR046W 1815 nt6.16□□□□□ -1.42
RPL40AP0CH08 YDL057WYDL057W 987 nt6.16□□□□□ -1.42
RPL40AP0CH08 YDL218WYDL218W 954 nt6.16□□□□□ -1.42
RPL40AP0CH08 YRB2YIL063C 984 nt6.16□□□□□ -1.42
RPL40AP0CH08 RPE1YJL121C 717 nt6.16□□□□□ -1.42
RPL40AP0CH08 YMR010WYMR010W 1218 nt6.16□□□□□ -1.42
RPL40AP0CH08 SNU66YOR308C 1764 nt6.16□□□□□ -1.42
RPL40AP0CH08 PRS2YER099C 957 nt6.15□□□□□ -1.42
Retrieved 100 of 7,029 protein–RNA pairs in 14.9 ms