Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD74P04233 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CD74P04233 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD74P04233 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD74P04233 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CD74P04233 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CD74P04233 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.62■□□□□ 0.89
CD74P04233 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.62■□□□□ 0.89
CD74P04233 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CD74P04233 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD74P04233 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD74P04233 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD74P04233 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CD74P04233 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.61■□□□□ 0.89
CD74P04233 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD74P04233 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD74P04233 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
CD74P04233 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD74P04233 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.6■□□□□ 0.89
CD74P04233 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD74P04233 AC022211.4-201ENST00000625094 2161 ntBASIC20.6■□□□□ 0.89
CD74P04233 AC138932.3-201ENST00000567634 1902 ntBASIC20.6■□□□□ 0.89
CD74P04233 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD74P04233 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD74P04233 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD74P04233 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD74P04233 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.59■□□□□ 0.89
CD74P04233 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CD74P04233 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD74P04233 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.59■□□□□ 0.89
CD74P04233 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.58■□□□□ 0.89
CD74P04233 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.58■□□□□ 0.89
CD74P04233 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CD74P04233 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CD74P04233 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.57■□□□□ 0.88
CD74P04233 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CD74P04233 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD74P04233 AC108673.1-201ENST00000510422 1159 ntBASIC20.57■□□□□ 0.88
CD74P04233 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.57■□□□□ 0.88
CD74P04233 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD74P04233 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD74P04233 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.57■□□□□ 0.88
CD74P04233 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.56■□□□□ 0.88
CD74P04233 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD74P04233 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.56■□□□□ 0.88
CD74P04233 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD74P04233 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CD74P04233 AC136428.2-201ENST00000563187 214 ntBASIC20.56■□□□□ 0.88
CD74P04233 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.56■□□□□ 0.88
CD74P04233 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CD74P04233 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CD74P04233 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.56■□□□□ 0.88
CD74P04233 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD74P04233 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.55■□□□□ 0.88
CD74P04233 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
CD74P04233 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CD74P04233 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD74P04233 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CD74P04233 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.55■□□□□ 0.88
CD74P04233 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD74P04233 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CD74P04233 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD74P04233 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.55■□□□□ 0.88
CD74P04233 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CD74P04233 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.54■□□□□ 0.88
CD74P04233 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.54■□□□□ 0.88
CD74P04233 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CD74P04233 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CD74P04233 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CD74P04233 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.53■□□□□ 0.88
CD74P04233 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD74P04233 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD74P04233 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CD74P04233 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD74P04233 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CD74P04233 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CD74P04233 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CD74P04233 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CD74P04233 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CD74P04233 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CD74P04233 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CD74P04233 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CD74P04233 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
CD74P04233 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CD74P04233 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD74P04233 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CD74P04233 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.51■□□□□ 0.87
CD74P04233 MIR6090-201ENST00000622481 60 ntBASIC20.51■□□□□ 0.87
CD74P04233 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.51■□□□□ 0.87
CD74P04233 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.51■□□□□ 0.87
CD74P04233 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.5■□□□□ 0.87
CD74P04233 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.5■□□□□ 0.87
CD74P04233 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.5■□□□□ 0.87
CD74P04233 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CD74P04233 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.5■□□□□ 0.87
CD74P04233 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD74P04233 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD74P04233 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD74P04233 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CD74P04233 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms