Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD74P04233 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CD74P04233 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD74P04233 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD74P04233 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CD74P04233 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CD74P04233 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.62■□□□□ 0.89
CD74P04233 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.62■□□□□ 0.89
CD74P04233 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CD74P04233 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD74P04233 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD74P04233 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD74P04233 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CD74P04233 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.61■□□□□ 0.89
CD74P04233 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD74P04233 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD74P04233 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
CD74P04233 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD74P04233 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.6■□□□□ 0.89
CD74P04233 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD74P04233 AC022211.4-201ENST00000625094 2161 ntBASIC20.6■□□□□ 0.89
CD74P04233 AC138932.3-201ENST00000567634 1902 ntBASIC20.6■□□□□ 0.89
CD74P04233 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD74P04233 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD74P04233 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD74P04233 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD74P04233 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.59■□□□□ 0.89
CD74P04233 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CD74P04233 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD74P04233 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.59■□□□□ 0.89
CD74P04233 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.58■□□□□ 0.89
CD74P04233 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.58■□□□□ 0.89
CD74P04233 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CD74P04233 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CD74P04233 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.57■□□□□ 0.88
CD74P04233 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CD74P04233 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD74P04233 AC108673.1-201ENST00000510422 1159 ntBASIC20.57■□□□□ 0.88
CD74P04233 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.57■□□□□ 0.88
CD74P04233 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD74P04233 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD74P04233 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.57■□□□□ 0.88
CD74P04233 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.56■□□□□ 0.88
CD74P04233 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD74P04233 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.56■□□□□ 0.88
CD74P04233 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD74P04233 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CD74P04233 AC136428.2-201ENST00000563187 214 ntBASIC20.56■□□□□ 0.88
CD74P04233 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.56■□□□□ 0.88
CD74P04233 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CD74P04233 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CD74P04233 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.56■□□□□ 0.88
CD74P04233 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD74P04233 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.55■□□□□ 0.88
CD74P04233 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
CD74P04233 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CD74P04233 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD74P04233 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CD74P04233 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.55■□□□□ 0.88
CD74P04233 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD74P04233 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CD74P04233 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD74P04233 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.55■□□□□ 0.88
CD74P04233 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CD74P04233 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.54■□□□□ 0.88
CD74P04233 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.54■□□□□ 0.88
CD74P04233 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CD74P04233 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CD74P04233 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CD74P04233 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.53■□□□□ 0.88
CD74P04233 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD74P04233 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD74P04233 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CD74P04233 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD74P04233 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CD74P04233 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CD74P04233 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CD74P04233 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CD74P04233 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CD74P04233 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CD74P04233 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CD74P04233 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CD74P04233 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
CD74P04233 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CD74P04233 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD74P04233 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CD74P04233 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.51■□□□□ 0.87
CD74P04233 MIR6090-201ENST00000622481 60 ntBASIC20.51■□□□□ 0.87
CD74P04233 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.51■□□□□ 0.87
CD74P04233 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.51■□□□□ 0.87
CD74P04233 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.5■□□□□ 0.87
CD74P04233 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.5■□□□□ 0.87
CD74P04233 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.5■□□□□ 0.87
CD74P04233 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CD74P04233 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.5■□□□□ 0.87
CD74P04233 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD74P04233 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD74P04233 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD74P04233 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CD74P04233 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms