Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6DO43924 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC18.96■□□□□ 0.63
PDE6DO43924 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.96■□□□□ 0.63
PDE6DO43924 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6DO43924 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PDE6DO43924 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6DO43924 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6DO43924 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.95■□□□□ 0.62
PDE6DO43924 AC142472.1-201ENST00000612013 1741 ntBASIC18.95■□□□□ 0.62
PDE6DO43924 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PDE6DO43924 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6DO43924 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6DO43924 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE6DO43924 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDE6DO43924 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC18.94■□□□□ 0.62
PDE6DO43924 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC18.94■□□□□ 0.62
PDE6DO43924 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6DO43924 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6DO43924 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6DO43924 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC18.93■□□□□ 0.62
PDE6DO43924 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC18.93■□□□□ 0.62
PDE6DO43924 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6DO43924 AC010501.1-201ENST00000606270 1962 ntBASIC18.93■□□□□ 0.62
PDE6DO43924 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PDE6DO43924 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6DO43924 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDE6DO43924 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDE6DO43924 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE6DO43924 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE6DO43924 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC18.92■□□□□ 0.62
PDE6DO43924 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PDE6DO43924 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.92■□□□□ 0.62
PDE6DO43924 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDE6DO43924 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDE6DO43924 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
PDE6DO43924 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.91■□□□□ 0.62
PDE6DO43924 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDE6DO43924 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
PDE6DO43924 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDE6DO43924 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDE6DO43924 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDE6DO43924 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
PDE6DO43924 AC022211.4-201ENST00000625094 2161 ntBASIC18.91■□□□□ 0.62
PDE6DO43924 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDE6DO43924 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDE6DO43924 AC138932.3-201ENST00000567634 1902 ntBASIC18.9■□□□□ 0.62
PDE6DO43924 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDE6DO43924 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PDE6DO43924 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDE6DO43924 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDE6DO43924 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDE6DO43924 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDE6DO43924 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDE6DO43924 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.89■□□□□ 0.61
PDE6DO43924 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDE6DO43924 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDE6DO43924 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDE6DO43924 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PDE6DO43924 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDE6DO43924 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
PDE6DO43924 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PDE6DO43924 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PDE6DO43924 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDE6DO43924 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDE6DO43924 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PDE6DO43924 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDE6DO43924 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDE6DO43924 AC135983.2-203ENST00000454486 1613 ntBASIC18.88■□□□□ 0.61
PDE6DO43924 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.88■□□□□ 0.61
PDE6DO43924 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
PDE6DO43924 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDE6DO43924 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PDE6DO43924 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDE6DO43924 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.87■□□□□ 0.61
PDE6DO43924 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDE6DO43924 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDE6DO43924 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PDE6DO43924 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.86■□□□□ 0.61
PDE6DO43924 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6DO43924 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PDE6DO43924 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6DO43924 AP002365.1-201ENST00000603448 772 ntBASIC18.86■□□□□ 0.61
PDE6DO43924 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6DO43924 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6DO43924 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
PDE6DO43924 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDE6DO43924 WHAMMP3-201ENST00000611636 1609 ntBASIC18.85■□□□□ 0.61
PDE6DO43924 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.85■□□□□ 0.61
PDE6DO43924 DENR-202ENST00000455982 1052 ntTSL 5 BASIC18.85■□□□□ 0.61
PDE6DO43924 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PDE6DO43924 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.85■□□□□ 0.61
PDE6DO43924 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.85■□□□□ 0.61
PDE6DO43924 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.85■□□□□ 0.61
PDE6DO43924 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDE6DO43924 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.85■□□□□ 0.61
PDE6DO43924 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE6DO43924 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE6DO43924 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE6DO43924 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE6DO43924 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms