Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 AC126177.7-201ENST00000547904 679 ntBASIC32.63■■■□□ 2.81
MSH5O43196 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC32.63■■■□□ 2.81
MSH5O43196 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC32.63■■■□□ 2.81
MSH5O43196 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
MSH5O43196 MOB2-207ENST00000614710 705 ntTSL 5 BASIC32.62■■■□□ 2.81
MSH5O43196 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
MSH5O43196 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
MSH5O43196 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
MSH5O43196 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC32.61■■■□□ 2.81
MSH5O43196 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
MSH5O43196 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC32.61■■■□□ 2.81
MSH5O43196 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
MSH5O43196 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC32.6■■■□□ 2.81
MSH5O43196 AL592293.1-201ENST00000502889 1188 ntBASIC32.6■■■□□ 2.81
MSH5O43196 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC32.6■■■□□ 2.81
MSH5O43196 SNAI3-AS1-204ENST00000567997 2048 ntBASIC32.6■■■□□ 2.81
MSH5O43196 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
MSH5O43196 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC32.59■■■□□ 2.81
MSH5O43196 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
MSH5O43196 AC133552.2-201ENST00000619106 1032 ntBASIC32.59■■■□□ 2.81
MSH5O43196 DRD5P2-201ENST00000421395 2012 ntBASIC32.59■■■□□ 2.81
MSH5O43196 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC32.59■■■□□ 2.81
MSH5O43196 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC32.58■■■□□ 2.81
MSH5O43196 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
MSH5O43196 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
MSH5O43196 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC32.57■■■□□ 2.8
MSH5O43196 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
MSH5O43196 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
MSH5O43196 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
MSH5O43196 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC32.55■■■□□ 2.8
MSH5O43196 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
MSH5O43196 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC32.55■■■□□ 2.8
MSH5O43196 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC32.55■■■□□ 2.8
MSH5O43196 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC32.55■■■□□ 2.8
MSH5O43196 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
MSH5O43196 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC32.54■■■□□ 2.8
MSH5O43196 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
MSH5O43196 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
MSH5O43196 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC32.54■■■□□ 2.8
MSH5O43196 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC32.53■■■□□ 2.8
MSH5O43196 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
MSH5O43196 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC32.53■■■□□ 2.8
MSH5O43196 AL449106.1-201ENST00000608517 1980 ntBASIC32.53■■■□□ 2.8
MSH5O43196 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
MSH5O43196 AC007029.1-201ENST00000604183 313 ntBASIC32.53■■■□□ 2.8
MSH5O43196 MED25-210ENST00000612854 801 ntTSL 5 BASIC32.53■■■□□ 2.8
MSH5O43196 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
MSH5O43196 MED25-214ENST00000622402 642 ntTSL 5 BASIC32.53■■■□□ 2.8
MSH5O43196 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
MSH5O43196 PKM-203ENST00000389093 2279 ntTSL 5 BASIC32.53■■■□□ 2.8
MSH5O43196 AC009831.1-201ENST00000580420 1582 ntBASIC32.53■■■□□ 2.8
MSH5O43196 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
MSH5O43196 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
MSH5O43196 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC32.52■■■□□ 2.8
MSH5O43196 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
MSH5O43196 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
MSH5O43196 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC32.51■■■□□ 2.79
MSH5O43196 BHLHE23-202ENST00000612929 1109 ntBASIC32.51■■■□□ 2.79
MSH5O43196 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
MSH5O43196 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
MSH5O43196 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
MSH5O43196 AL157400.5-201ENST00000507624 621 ntBASIC32.49■■■□□ 2.79
MSH5O43196 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
MSH5O43196 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
MSH5O43196 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC32.48■■■□□ 2.79
MSH5O43196 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
MSH5O43196 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC32.48■■■□□ 2.79
MSH5O43196 PEX7-203ENST00000541292 945 ntTSL 5 BASIC32.48■■■□□ 2.79
MSH5O43196 KRT8P33-201ENST00000508125 1423 ntBASIC32.48■■■□□ 2.79
MSH5O43196 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
MSH5O43196 AC131212.1-201ENST00000613771 668 ntBASIC32.47■■■□□ 2.79
MSH5O43196 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC32.47■■■□□ 2.79
MSH5O43196 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
MSH5O43196 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
MSH5O43196 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
MSH5O43196 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC32.46■■■□□ 2.79
MSH5O43196 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC32.46■■■□□ 2.79
MSH5O43196 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
MSH5O43196 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.79
MSH5O43196 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC32.45■■■□□ 2.79
MSH5O43196 REST-210ENST00000638187 1334 ntTSL 5 BASIC32.45■■■□□ 2.78
MSH5O43196 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC32.44■■■□□ 2.78
MSH5O43196 BNIP3P41-202ENST00000616656 861 ntBASIC32.44■■■□□ 2.78
MSH5O43196 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
MSH5O43196 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC32.43■■■□□ 2.78
MSH5O43196 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
MSH5O43196 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
MSH5O43196 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC32.42■■■□□ 2.78
MSH5O43196 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
MSH5O43196 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
MSH5O43196 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
MSH5O43196 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
MSH5O43196 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
MSH5O43196 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC32.41■■■□□ 2.78
MSH5O43196 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC32.41■■■□□ 2.78
MSH5O43196 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC32.41■■■□□ 2.78
MSH5O43196 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC32.41■■■□□ 2.78
MSH5O43196 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC32.41■■■□□ 2.78
MSH5O43196 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC32.41■■■□□ 2.78
MSH5O43196 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms