Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 AC026202.3-201ENST00000600805 1127 ntBASIC26.4■■□□□ 1.82
SPTLC1O15269 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SPTLC1O15269 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SPTLC1O15269 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
SPTLC1O15269 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
SPTLC1O15269 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SPTLC1O15269 RP9P-202ENST00000450133 1212 ntBASIC26.39■■□□□ 1.82
SPTLC1O15269 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
SPTLC1O15269 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.38■■□□□ 1.81
SPTLC1O15269 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SPTLC1O15269 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SPTLC1O15269 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC26.38■■□□□ 1.81
SPTLC1O15269 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
SPTLC1O15269 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SPTLC1O15269 AC093536.1-201ENST00000569153 554 ntBASIC26.37■■□□□ 1.81
SPTLC1O15269 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SPTLC1O15269 AC133552.2-201ENST00000619106 1032 ntBASIC26.37■■□□□ 1.81
SPTLC1O15269 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
SPTLC1O15269 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SPTLC1O15269 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.36■■□□□ 1.81
SPTLC1O15269 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SPTLC1O15269 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SPTLC1O15269 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.36■■□□□ 1.81
SPTLC1O15269 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SPTLC1O15269 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SPTLC1O15269 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SPTLC1O15269 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.35■■□□□ 1.81
SPTLC1O15269 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SPTLC1O15269 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.34■■□□□ 1.81
SPTLC1O15269 AL592293.1-201ENST00000502889 1188 ntBASIC26.34■■□□□ 1.81
SPTLC1O15269 MIR3960-201ENST00000583311 91 ntBASIC26.34■■□□□ 1.81
SPTLC1O15269 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SPTLC1O15269 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SPTLC1O15269 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SPTLC1O15269 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
SPTLC1O15269 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SPTLC1O15269 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
SPTLC1O15269 RAP2CP1-202ENST00000605179 643 ntBASIC26.33■■□□□ 1.81
SPTLC1O15269 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.33■■□□□ 1.81
SPTLC1O15269 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SPTLC1O15269 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SPTLC1O15269 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
SPTLC1O15269 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.32■■□□□ 1.8
SPTLC1O15269 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SPTLC1O15269 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.32■■□□□ 1.8
SPTLC1O15269 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.31■■□□□ 1.8
SPTLC1O15269 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SPTLC1O15269 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
SPTLC1O15269 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
SPTLC1O15269 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.3■■□□□ 1.8
SPTLC1O15269 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SPTLC1O15269 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SPTLC1O15269 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
SPTLC1O15269 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
SPTLC1O15269 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.29■■□□□ 1.8
SPTLC1O15269 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
SPTLC1O15269 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SPTLC1O15269 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
SPTLC1O15269 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
SPTLC1O15269 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.28■■□□□ 1.8
SPTLC1O15269 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SPTLC1O15269 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.28■■□□□ 1.8
SPTLC1O15269 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SPTLC1O15269 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.27■■□□□ 1.8
SPTLC1O15269 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
SPTLC1O15269 AC004987.1-201ENST00000428627 508 ntBASIC26.27■■□□□ 1.8
SPTLC1O15269 AL033527.3-201ENST00000566366 1196 ntBASIC26.27■■□□□ 1.8
SPTLC1O15269 AC129492.7-201ENST00000622992 756 ntBASIC26.27■■□□□ 1.8
SPTLC1O15269 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SPTLC1O15269 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SPTLC1O15269 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SPTLC1O15269 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
SPTLC1O15269 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26.26■■□□□ 1.79
SPTLC1O15269 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SPTLC1O15269 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SPTLC1O15269 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SPTLC1O15269 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SPTLC1O15269 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPTLC1O15269 ATP5G2P3-201ENST00000429083 425 ntBASIC26.24■■□□□ 1.79
SPTLC1O15269 HES4-204ENST00000484667 667 ntTSL 3 BASIC26.24■■□□□ 1.79
SPTLC1O15269 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPTLC1O15269 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
SPTLC1O15269 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
SPTLC1O15269 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SPTLC1O15269 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SPTLC1O15269 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SPTLC1O15269 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SPTLC1O15269 AC142472.1-201ENST00000612013 1741 ntBASIC26.22■■□□□ 1.79
SPTLC1O15269 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
SPTLC1O15269 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.22■■□□□ 1.79
SPTLC1O15269 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
SPTLC1O15269 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.22■■□□□ 1.79
SPTLC1O15269 AP004609.3-201ENST00000610705 1884 ntBASIC26.21■■□□□ 1.79
SPTLC1O15269 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
SPTLC1O15269 SPCS2P3-201ENST00000500401 656 ntBASIC26.21■■□□□ 1.79
SPTLC1O15269 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
SPTLC1O15269 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.21■■□□□ 1.79
SPTLC1O15269 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SPTLC1O15269 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SPTLC1O15269 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms