Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.67■□□□□ 0.74
UPK2O00526 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.67■□□□□ 0.74
UPK2O00526 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.67■□□□□ 0.74
UPK2O00526 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UPK2O00526 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UPK2O00526 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UPK2O00526 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
UPK2O00526 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPK2O00526 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
UPK2O00526 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.66■□□□□ 0.74
UPK2O00526 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.66■□□□□ 0.74
UPK2O00526 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPK2O00526 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPK2O00526 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UPK2O00526 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
UPK2O00526 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UPK2O00526 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UPK2O00526 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.65■□□□□ 0.74
UPK2O00526 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UPK2O00526 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UPK2O00526 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UPK2O00526 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UPK2O00526 AC148477.6-201ENST00000623746 465 ntBASIC19.64■□□□□ 0.73
UPK2O00526 MIR219A2-201ENST00000608502 1504 ntBASIC19.64■□□□□ 0.73
UPK2O00526 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPK2O00526 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UPK2O00526 AC020928.2-201ENST00000588717 2197 ntBASIC19.63■□□□□ 0.73
UPK2O00526 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UPK2O00526 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
UPK2O00526 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UPK2O00526 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPK2O00526 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UPK2O00526 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
UPK2O00526 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
UPK2O00526 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.62■□□□□ 0.73
UPK2O00526 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPK2O00526 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.62■□□□□ 0.73
UPK2O00526 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPK2O00526 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPK2O00526 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.62■□□□□ 0.73
UPK2O00526 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
UPK2O00526 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPK2O00526 ZNRF2P2-203ENST00000454624 420 ntBASIC19.61■□□□□ 0.73
UPK2O00526 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.61■□□□□ 0.73
UPK2O00526 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UPK2O00526 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.6■□□□□ 0.73
UPK2O00526 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPK2O00526 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.6■□□□□ 0.73
UPK2O00526 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UPK2O00526 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPK2O00526 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UPK2O00526 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.59■□□□□ 0.73
UPK2O00526 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.59■□□□□ 0.73
UPK2O00526 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UPK2O00526 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPK2O00526 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.59■□□□□ 0.73
UPK2O00526 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.59■□□□□ 0.73
UPK2O00526 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPK2O00526 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.59■□□□□ 0.73
UPK2O00526 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UPK2O00526 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
UPK2O00526 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
UPK2O00526 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UPK2O00526 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UPK2O00526 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.58■□□□□ 0.72
UPK2O00526 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UPK2O00526 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UPK2O00526 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UPK2O00526 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UPK2O00526 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
UPK2O00526 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UPK2O00526 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
UPK2O00526 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UPK2O00526 HLA-V-202ENST00000446817 847 ntBASIC19.57■□□□□ 0.72
UPK2O00526 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.57■□□□□ 0.72
UPK2O00526 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
UPK2O00526 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPK2O00526 AC135731.1-201ENST00000569415 2548 ntBASIC19.56■□□□□ 0.72
UPK2O00526 AC010501.1-201ENST00000606270 1962 ntBASIC19.56■□□□□ 0.72
UPK2O00526 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPK2O00526 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
UPK2O00526 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.56■□□□□ 0.72
UPK2O00526 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.56■□□□□ 0.72
UPK2O00526 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.56■□□□□ 0.72
UPK2O00526 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPK2O00526 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
UPK2O00526 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UPK2O00526 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPK2O00526 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPK2O00526 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UPK2O00526 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UPK2O00526 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
UPK2O00526 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.55■□□□□ 0.72
UPK2O00526 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPK2O00526 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.55■□□□□ 0.72
UPK2O00526 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.55■□□□□ 0.72
UPK2O00526 ERN1-208ENST00000606895 2068 ntBASIC19.55■□□□□ 0.72
UPK2O00526 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPK2O00526 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPK2O00526 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms