Protein–RNA interactions for Protein: A2A288

ZC3H12D, Probable ribonuclease ZC3H12D, humanhuman

Known RBP Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12DA2A288 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ZC3H12DA2A288 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.4■■□□□ 1.18
ZC3H12DA2A288 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ZC3H12DA2A288 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
ZC3H12DA2A288 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
ZC3H12DA2A288 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
ZC3H12DA2A288 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.39■■□□□ 1.17
ZC3H12DA2A288 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
ZC3H12DA2A288 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
ZC3H12DA2A288 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
ZC3H12DA2A288 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ZC3H12DA2A288 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.38■■□□□ 1.17
ZC3H12DA2A288 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.38■■□□□ 1.17
ZC3H12DA2A288 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.38■■□□□ 1.17
ZC3H12DA2A288 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ZC3H12DA2A288 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ZC3H12DA2A288 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.37■■□□□ 1.17
ZC3H12DA2A288 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC22.37■■□□□ 1.17
ZC3H12DA2A288 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ZC3H12DA2A288 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ZC3H12DA2A288 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.36■■□□□ 1.17
ZC3H12DA2A288 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ZC3H12DA2A288 AP004609.3-201ENST00000610705 1884 ntBASIC22.36■■□□□ 1.17
ZC3H12DA2A288 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ZC3H12DA2A288 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
ZC3H12DA2A288 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
ZC3H12DA2A288 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ZC3H12DA2A288 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.35■■□□□ 1.17
ZC3H12DA2A288 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.35■■□□□ 1.17
ZC3H12DA2A288 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ZC3H12DA2A288 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.35■■□□□ 1.17
ZC3H12DA2A288 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
ZC3H12DA2A288 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ZC3H12DA2A288 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
ZC3H12DA2A288 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.34■■□□□ 1.17
ZC3H12DA2A288 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ZC3H12DA2A288 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ZC3H12DA2A288 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC22.34■■□□□ 1.17
ZC3H12DA2A288 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
ZC3H12DA2A288 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ZC3H12DA2A288 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
ZC3H12DA2A288 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
ZC3H12DA2A288 MBP-237ENST00000579129 1052 ntTSL 5 BASIC22.33■■□□□ 1.17
ZC3H12DA2A288 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.32■■□□□ 1.16
ZC3H12DA2A288 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ZC3H12DA2A288 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ZC3H12DA2A288 AL359258.2-201ENST00000564063 1566 ntBASIC22.32■■□□□ 1.16
ZC3H12DA2A288 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.31■■□□□ 1.16
ZC3H12DA2A288 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.31■■□□□ 1.16
ZC3H12DA2A288 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ZC3H12DA2A288 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ZC3H12DA2A288 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.31■■□□□ 1.16
ZC3H12DA2A288 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ZC3H12DA2A288 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.29■■□□□ 1.16
ZC3H12DA2A288 AC142472.1-201ENST00000612013 1741 ntBASIC22.28■■□□□ 1.16
ZC3H12DA2A288 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZC3H12DA2A288 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ZC3H12DA2A288 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ZC3H12DA2A288 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZC3H12DA2A288 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ZC3H12DA2A288 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC22.28■■□□□ 1.16
ZC3H12DA2A288 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
ZC3H12DA2A288 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.28■■□□□ 1.16
ZC3H12DA2A288 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ZC3H12DA2A288 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ZC3H12DA2A288 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZC3H12DA2A288 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZC3H12DA2A288 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZC3H12DA2A288 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.27■■□□□ 1.16
ZC3H12DA2A288 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ZC3H12DA2A288 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ZC3H12DA2A288 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ZC3H12DA2A288 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
ZC3H12DA2A288 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ZC3H12DA2A288 AC145676.1-201ENST00000514988 2004 ntBASIC22.26■■□□□ 1.15
ZC3H12DA2A288 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.26■■□□□ 1.15
ZC3H12DA2A288 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ZC3H12DA2A288 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ZC3H12DA2A288 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZC3H12DA2A288 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
ZC3H12DA2A288 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ZC3H12DA2A288 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.26■■□□□ 1.15
ZC3H12DA2A288 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.26■■□□□ 1.15
ZC3H12DA2A288 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZC3H12DA2A288 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZC3H12DA2A288 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZC3H12DA2A288 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.24■■□□□ 1.15
ZC3H12DA2A288 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H12DA2A288 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H12DA2A288 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
ZC3H12DA2A288 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H12DA2A288 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H12DA2A288 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H12DA2A288 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3H12DA2A288 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3H12DA2A288 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3H12DA2A288 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3H12DA2A288 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.23■■□□□ 1.15
ZC3H12DA2A288 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.23■■□□□ 1.15
ZC3H12DA2A288 MIR4449-201ENST00000578365 66 ntBASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms