Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV20-1A0A075B6N2 AP004833.2-201ENST00000532228 1454 ntBASIC16.43■□□□□ 0.22
TRBV20-1A0A075B6N2 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TRBV20-1A0A075B6N2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV20-1A0A075B6N2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
TRBV20-1A0A075B6N2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV20-1A0A075B6N2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC16.43■□□□□ 0.22
TRBV20-1A0A075B6N2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV20-1A0A075B6N2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV20-1A0A075B6N2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC16.42■□□□□ 0.22
TRBV20-1A0A075B6N2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV20-1A0A075B6N2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRBV20-1A0A075B6N2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRBV20-1A0A075B6N2 AL139125.2-201ENST00000623134 1869 ntBASIC16.42■□□□□ 0.22
TRBV20-1A0A075B6N2 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV20-1A0A075B6N2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV20-1A0A075B6N2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TRBV20-1A0A075B6N2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV20-1A0A075B6N2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV20-1A0A075B6N2 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV20-1A0A075B6N2 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV20-1A0A075B6N2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV20-1A0A075B6N2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV20-1A0A075B6N2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV20-1A0A075B6N2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.4■□□□□ 0.22
TRBV20-1A0A075B6N2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV20-1A0A075B6N2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC16.4■□□□□ 0.22
TRBV20-1A0A075B6N2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.4■□□□□ 0.22
TRBV20-1A0A075B6N2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV20-1A0A075B6N2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV20-1A0A075B6N2 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV20-1A0A075B6N2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV20-1A0A075B6N2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRBV20-1A0A075B6N2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV20-1A0A075B6N2 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV20-1A0A075B6N2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV20-1A0A075B6N2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TRBV20-1A0A075B6N2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV20-1A0A075B6N2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV20-1A0A075B6N2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV20-1A0A075B6N2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV20-1A0A075B6N2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV20-1A0A075B6N2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV20-1A0A075B6N2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV20-1A0A075B6N2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV20-1A0A075B6N2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRBV20-1A0A075B6N2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV20-1A0A075B6N2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.37■□□□□ 0.21
TRBV20-1A0A075B6N2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV20-1A0A075B6N2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV20-1A0A075B6N2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV20-1A0A075B6N2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC16.37■□□□□ 0.21
TRBV20-1A0A075B6N2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV20-1A0A075B6N2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV20-1A0A075B6N2 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV20-1A0A075B6N2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV20-1A0A075B6N2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRBV20-1A0A075B6N2 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV20-1A0A075B6N2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV20-1A0A075B6N2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRBV20-1A0A075B6N2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC16.36■□□□□ 0.21
TRBV20-1A0A075B6N2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV20-1A0A075B6N2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV20-1A0A075B6N2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC16.35■□□□□ 0.21
TRBV20-1A0A075B6N2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV20-1A0A075B6N2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV20-1A0A075B6N2 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV20-1A0A075B6N2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRBV20-1A0A075B6N2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV20-1A0A075B6N2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.34■□□□□ 0.21
TRBV20-1A0A075B6N2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV20-1A0A075B6N2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV20-1A0A075B6N2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV20-1A0A075B6N2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV20-1A0A075B6N2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
TRBV20-1A0A075B6N2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV20-1A0A075B6N2 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV20-1A0A075B6N2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV20-1A0A075B6N2 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV20-1A0A075B6N2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC16.33■□□□□ 0.2
TRBV20-1A0A075B6N2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV20-1A0A075B6N2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV20-1A0A075B6N2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV20-1A0A075B6N2 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV20-1A0A075B6N2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBV20-1A0A075B6N2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
TRBV20-1A0A075B6N2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
TRBV20-1A0A075B6N2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBV20-1A0A075B6N2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
TRBV20-1A0A075B6N2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV20-1A0A075B6N2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
TRBV20-1A0A075B6N2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV20-1A0A075B6N2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV20-1A0A075B6N2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV20-1A0A075B6N2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV20-1A0A075B6N2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV20-1A0A075B6N2 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV20-1A0A075B6N2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRBV20-1A0A075B6N2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV20-1A0A075B6N2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms