Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HCFC2Q9Y5Z7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
HCFC2Q9Y5Z7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HCFC2Q9Y5Z7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
HCFC2Q9Y5Z7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.52■□□□□ 0.56
HCFC2Q9Y5Z7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HCFC2Q9Y5Z7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HCFC2Q9Y5Z7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.52■□□□□ 0.56
HCFC2Q9Y5Z7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.52■□□□□ 0.56
HCFC2Q9Y5Z7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.52■□□□□ 0.56
HCFC2Q9Y5Z7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.52■□□□□ 0.56
HCFC2Q9Y5Z7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.52■□□□□ 0.56
HCFC2Q9Y5Z7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.52■□□□□ 0.56
HCFC2Q9Y5Z7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.52■□□□□ 0.56
HCFC2Q9Y5Z7 AC010654.1-201ENST00000615722 808 ntBASIC18.52■□□□□ 0.56
HCFC2Q9Y5Z7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.52■□□□□ 0.56
HCFC2Q9Y5Z7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HCFC2Q9Y5Z7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
HCFC2Q9Y5Z7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.52■□□□□ 0.55
HCFC2Q9Y5Z7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
HCFC2Q9Y5Z7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
HCFC2Q9Y5Z7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
HCFC2Q9Y5Z7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HCFC2Q9Y5Z7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HCFC2Q9Y5Z7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
HCFC2Q9Y5Z7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HCFC2Q9Y5Z7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.51■□□□□ 0.55
HCFC2Q9Y5Z7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
HCFC2Q9Y5Z7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.51■□□□□ 0.55
HCFC2Q9Y5Z7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HCFC2Q9Y5Z7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.51■□□□□ 0.55
HCFC2Q9Y5Z7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.51■□□□□ 0.55
HCFC2Q9Y5Z7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.51■□□□□ 0.55
HCFC2Q9Y5Z7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.51■□□□□ 0.55
HCFC2Q9Y5Z7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
HCFC2Q9Y5Z7 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.51■□□□□ 0.55
HCFC2Q9Y5Z7 PDPK2P-202ENST00000562415 1191 ntBASIC18.51■□□□□ 0.55
HCFC2Q9Y5Z7 AL031432.2-201ENST00000566714 459 ntBASIC18.51■□□□□ 0.55
HCFC2Q9Y5Z7 AL928711.1-201ENST00000570165 459 ntBASIC18.51■□□□□ 0.55
HCFC2Q9Y5Z7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.51■□□□□ 0.55
HCFC2Q9Y5Z7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
HCFC2Q9Y5Z7 AL805961.1-202ENST00000641562 540 ntBASIC18.51■□□□□ 0.55
HCFC2Q9Y5Z7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
HCFC2Q9Y5Z7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.51■□□□□ 0.55
HCFC2Q9Y5Z7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HCFC2Q9Y5Z7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
HCFC2Q9Y5Z7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
HCFC2Q9Y5Z7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.5■□□□□ 0.55
HCFC2Q9Y5Z7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.5■□□□□ 0.55
HCFC2Q9Y5Z7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.5■□□□□ 0.55
HCFC2Q9Y5Z7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.5■□□□□ 0.55
HCFC2Q9Y5Z7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HCFC2Q9Y5Z7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HCFC2Q9Y5Z7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HCFC2Q9Y5Z7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HCFC2Q9Y5Z7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HCFC2Q9Y5Z7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HCFC2Q9Y5Z7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
HCFC2Q9Y5Z7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
HCFC2Q9Y5Z7 MRPL20P1-201ENST00000400819 433 ntBASIC18.5■□□□□ 0.55
HCFC2Q9Y5Z7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.5■□□□□ 0.55
HCFC2Q9Y5Z7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.5■□□□□ 0.55
HCFC2Q9Y5Z7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.5■□□□□ 0.55
HCFC2Q9Y5Z7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.5■□□□□ 0.55
HCFC2Q9Y5Z7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.5■□□□□ 0.55
HCFC2Q9Y5Z7 AC027612.4-201ENST00000605371 583 ntBASIC18.5■□□□□ 0.55
HCFC2Q9Y5Z7 AC019129.2-201ENST00000609837 1235 ntBASIC18.5■□□□□ 0.55
HCFC2Q9Y5Z7 AC010507.1-201ENST00000633895 436 ntBASIC18.5■□□□□ 0.55
HCFC2Q9Y5Z7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HCFC2Q9Y5Z7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HCFC2Q9Y5Z7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HCFC2Q9Y5Z7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.49■□□□□ 0.55
HCFC2Q9Y5Z7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HCFC2Q9Y5Z7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HCFC2Q9Y5Z7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HCFC2Q9Y5Z7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.49■□□□□ 0.55
HCFC2Q9Y5Z7 AC018445.3-201ENST00000624177 1945 ntBASIC18.49■□□□□ 0.55
HCFC2Q9Y5Z7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HCFC2Q9Y5Z7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HCFC2Q9Y5Z7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HCFC2Q9Y5Z7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
HCFC2Q9Y5Z7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HCFC2Q9Y5Z7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.49■□□□□ 0.55
HCFC2Q9Y5Z7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
HCFC2Q9Y5Z7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.49■□□□□ 0.55
HCFC2Q9Y5Z7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.49■□□□□ 0.55
HCFC2Q9Y5Z7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.49■□□□□ 0.55
HCFC2Q9Y5Z7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.49■□□□□ 0.55
HCFC2Q9Y5Z7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.49■□□□□ 0.55
HCFC2Q9Y5Z7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.49■□□□□ 0.55
HCFC2Q9Y5Z7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.49■□□□□ 0.55
HCFC2Q9Y5Z7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.49■□□□□ 0.55
HCFC2Q9Y5Z7 AC106028.4-201ENST00000614509 607 ntBASIC18.49■□□□□ 0.55
HCFC2Q9Y5Z7 AC004877.2-201ENST00000623941 599 ntBASIC18.49■□□□□ 0.55
HCFC2Q9Y5Z7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.49■□□□□ 0.55
HCFC2Q9Y5Z7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HCFC2Q9Y5Z7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HCFC2Q9Y5Z7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HCFC2Q9Y5Z7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HCFC2Q9Y5Z7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms