Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAI2Q9Y5P3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAI2Q9Y5P3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.03■□□□□ 0.48
RAI2Q9Y5P3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.03■□□□□ 0.48
RAI2Q9Y5P3 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.03■□□□□ 0.48
RAI2Q9Y5P3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.03■□□□□ 0.48
RAI2Q9Y5P3 Z69720.1-201ENST00000601483 472 ntBASIC18.03■□□□□ 0.48
RAI2Q9Y5P3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAI2Q9Y5P3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RAI2Q9Y5P3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RAI2Q9Y5P3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAI2Q9Y5P3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RAI2Q9Y5P3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAI2Q9Y5P3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAI2Q9Y5P3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAI2Q9Y5P3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RAI2Q9Y5P3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAI2Q9Y5P3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.02■□□□□ 0.48
RAI2Q9Y5P3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.02■□□□□ 0.48
RAI2Q9Y5P3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAI2Q9Y5P3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAI2Q9Y5P3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
RAI2Q9Y5P3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.02■□□□□ 0.48
RAI2Q9Y5P3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.02■□□□□ 0.48
RAI2Q9Y5P3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAI2Q9Y5P3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAI2Q9Y5P3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAI2Q9Y5P3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAI2Q9Y5P3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAI2Q9Y5P3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAI2Q9Y5P3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
RAI2Q9Y5P3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.02■□□□□ 0.48
RAI2Q9Y5P3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAI2Q9Y5P3 AC005336.2-201ENST00000593183 939 ntBASIC18.02■□□□□ 0.48
RAI2Q9Y5P3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAI2Q9Y5P3 AC116407.2-201ENST00000613639 860 ntBASIC18.02■□□□□ 0.48
RAI2Q9Y5P3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.02■□□□□ 0.48
RAI2Q9Y5P3 AL031008.1-201ENST00000619963 541 ntBASIC18.02■□□□□ 0.48
RAI2Q9Y5P3 AC139530.3-201ENST00000620344 690 ntBASIC18.02■□□□□ 0.48
RAI2Q9Y5P3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RAI2Q9Y5P3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
RAI2Q9Y5P3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.02■□□□□ 0.48
RAI2Q9Y5P3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RAI2Q9Y5P3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.02■□□□□ 0.48
RAI2Q9Y5P3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
RAI2Q9Y5P3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
RAI2Q9Y5P3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RAI2Q9Y5P3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RAI2Q9Y5P3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.02■□□□□ 0.47
RAI2Q9Y5P3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RAI2Q9Y5P3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.02■□□□□ 0.47
RAI2Q9Y5P3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
RAI2Q9Y5P3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
RAI2Q9Y5P3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RAI2Q9Y5P3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RAI2Q9Y5P3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 AC090340.1-201ENST00000620778 4980 ntBASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 AC104692.2-201ENST00000603054 253 ntBASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 IFNL4P1-201ENST00000607083 540 ntBASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAI2Q9Y5P3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18■□□□□ 0.47
RAI2Q9Y5P3 AC009949.1-201ENST00000623048 1830 ntBASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms