Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 SLC25A6P4-201ENST00000586535 553 ntBASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 AC008687.5-201ENST00000593746 558 ntBASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 AL163051.1-201ENST00000569214 1512 ntBASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 AL499627.1-201ENST00000569373 2188 ntBASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 AC135776.1-201ENST00000319817 2481 ntBASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGA6Q9Y5G7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 POM121L3P-201ENST00000419331 1163 ntBASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA6Q9Y5G7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
PCDHGA6Q9Y5G7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA6Q9Y5G7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA6Q9Y5G7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA6Q9Y5G7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA6Q9Y5G7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA6Q9Y5G7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
PCDHGA6Q9Y5G7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA6Q9Y5G7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA6Q9Y5G7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA6Q9Y5G7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA6Q9Y5G7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA6Q9Y5G7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA6Q9Y5G7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA6Q9Y5G7 AP000347.1-202ENST00000435868 847 ntBASIC17.17■□□□□ 0.34
PCDHGA6Q9Y5G7 SAPCD2P3-201ENST00000455031 850 ntBASIC17.17■□□□□ 0.34
PCDHGA6Q9Y5G7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHGA6Q9Y5G7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHGA6Q9Y5G7 AC011840.4-201ENST00000578471 627 ntBASIC17.17■□□□□ 0.34
PCDHGA6Q9Y5G7 AP005901.3-202ENST00000581653 237 ntBASIC17.17■□□□□ 0.34
PCDHGA6Q9Y5G7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PCDHGA6Q9Y5G7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHGA6Q9Y5G7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.17■□□□□ 0.34
PCDHGA6Q9Y5G7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PCDHGA6Q9Y5G7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA6Q9Y5G7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA6Q9Y5G7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA6Q9Y5G7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHGA6Q9Y5G7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGA6Q9Y5G7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 GNAS-203ENST00000306120 1878 ntBASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA6Q9Y5G7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms