Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LEMD3Q9Y2U8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LEMD3Q9Y2U8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LEMD3Q9Y2U8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LEMD3Q9Y2U8 AC009949.1-201ENST00000623048 1830 ntBASIC21.52■■□□□ 1.04
LEMD3Q9Y2U8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LEMD3Q9Y2U8 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.52■■□□□ 1.04
LEMD3Q9Y2U8 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
LEMD3Q9Y2U8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.52■■□□□ 1.03
LEMD3Q9Y2U8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.52■■□□□ 1.03
LEMD3Q9Y2U8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LEMD3Q9Y2U8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
LEMD3Q9Y2U8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
LEMD3Q9Y2U8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.51■■□□□ 1.03
LEMD3Q9Y2U8 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
LEMD3Q9Y2U8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LEMD3Q9Y2U8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.51■■□□□ 1.03
LEMD3Q9Y2U8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC21.51■■□□□ 1.03
LEMD3Q9Y2U8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.51■■□□□ 1.03
LEMD3Q9Y2U8 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
LEMD3Q9Y2U8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LEMD3Q9Y2U8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC21.51■■□□□ 1.03
LEMD3Q9Y2U8 HNRNPA1P28-201ENST00000424481 961 ntBASIC21.51■■□□□ 1.03
LEMD3Q9Y2U8 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LEMD3Q9Y2U8 STK19B-204ENST00000512515 211 ntBASIC21.51■■□□□ 1.03
LEMD3Q9Y2U8 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC21.51■■□□□ 1.03
LEMD3Q9Y2U8 IGHV3-65-201ENST00000523210 341 ntBASIC21.51■■□□□ 1.03
LEMD3Q9Y2U8 DHDH-204ENST00000523250 634 ntTSL 5 BASIC21.51■■□□□ 1.03
LEMD3Q9Y2U8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC21.51■■□□□ 1.03
LEMD3Q9Y2U8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC21.51■■□□□ 1.03
LEMD3Q9Y2U8 MTDHP5-201ENST00000598980 586 ntBASIC21.51■■□□□ 1.03
LEMD3Q9Y2U8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.51■■□□□ 1.03
LEMD3Q9Y2U8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LEMD3Q9Y2U8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LEMD3Q9Y2U8 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.51■■□□□ 1.03
LEMD3Q9Y2U8 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LEMD3Q9Y2U8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
LEMD3Q9Y2U8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LEMD3Q9Y2U8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.51■■□□□ 1.03
LEMD3Q9Y2U8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.5■■□□□ 1.03
LEMD3Q9Y2U8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LEMD3Q9Y2U8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.5■■□□□ 1.03
LEMD3Q9Y2U8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
LEMD3Q9Y2U8 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.5■■□□□ 1.03
LEMD3Q9Y2U8 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LEMD3Q9Y2U8 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LEMD3Q9Y2U8 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC21.5■■□□□ 1.03
LEMD3Q9Y2U8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
LEMD3Q9Y2U8 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
LEMD3Q9Y2U8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
LEMD3Q9Y2U8 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC21.5■■□□□ 1.03
LEMD3Q9Y2U8 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC21.5■■□□□ 1.03
LEMD3Q9Y2U8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
LEMD3Q9Y2U8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC21.5■■□□□ 1.03
LEMD3Q9Y2U8 IGHV3-52-201ENST00000519770 353 ntBASIC21.5■■□□□ 1.03
LEMD3Q9Y2U8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC21.5■■□□□ 1.03
LEMD3Q9Y2U8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC21.5■■□□□ 1.03
LEMD3Q9Y2U8 AC008667.4-201ENST00000607370 168 ntBASIC21.5■■□□□ 1.03
LEMD3Q9Y2U8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
LEMD3Q9Y2U8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
LEMD3Q9Y2U8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LEMD3Q9Y2U8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LEMD3Q9Y2U8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
LEMD3Q9Y2U8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.5■■□□□ 1.03
LEMD3Q9Y2U8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LEMD3Q9Y2U8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LEMD3Q9Y2U8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
LEMD3Q9Y2U8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.5■■□□□ 1.03
LEMD3Q9Y2U8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
LEMD3Q9Y2U8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
LEMD3Q9Y2U8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.49■■□□□ 1.03
LEMD3Q9Y2U8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.49■■□□□ 1.03
LEMD3Q9Y2U8 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
LEMD3Q9Y2U8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LEMD3Q9Y2U8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LEMD3Q9Y2U8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LEMD3Q9Y2U8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LEMD3Q9Y2U8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.49■■□□□ 1.03
LEMD3Q9Y2U8 CRYGEP-201ENST00000412192 528 ntBASIC21.49■■□□□ 1.03
LEMD3Q9Y2U8 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21.49■■□□□ 1.03
LEMD3Q9Y2U8 RPS15P9-201ENST00000494093 319 ntBASIC21.49■■□□□ 1.03
LEMD3Q9Y2U8 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC21.49■■□□□ 1.03
LEMD3Q9Y2U8 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC21.49■■□□□ 1.03
LEMD3Q9Y2U8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC21.49■■□□□ 1.03
LEMD3Q9Y2U8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC21.49■■□□□ 1.03
LEMD3Q9Y2U8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
LEMD3Q9Y2U8 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC21.49■■□□□ 1.03
LEMD3Q9Y2U8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC21.49■■□□□ 1.03
LEMD3Q9Y2U8 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC21.49■■□□□ 1.03
LEMD3Q9Y2U8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
LEMD3Q9Y2U8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LEMD3Q9Y2U8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LEMD3Q9Y2U8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LEMD3Q9Y2U8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.49■■□□□ 1.03
LEMD3Q9Y2U8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LEMD3Q9Y2U8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
LEMD3Q9Y2U8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LEMD3Q9Y2U8 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
LEMD3Q9Y2U8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
LEMD3Q9Y2U8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms