Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
NINLQ9Y2I6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC24.26■■□□□ 1.47
NINLQ9Y2I6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NINLQ9Y2I6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC24.26■■□□□ 1.47
NINLQ9Y2I6 FABP5-202ENST00000396359 986 ntTSL 5 BASIC24.26■■□□□ 1.47
NINLQ9Y2I6 HNRNPA1P28-201ENST00000424481 961 ntBASIC24.26■■□□□ 1.47
NINLQ9Y2I6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC24.26■■□□□ 1.47
NINLQ9Y2I6 AC098831.1-202ENST00000438821 336 ntBASIC24.26■■□□□ 1.47
NINLQ9Y2I6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
NINLQ9Y2I6 AC105339.3-201ENST00000560043 636 ntBASIC24.26■■□□□ 1.47
NINLQ9Y2I6 MIR3197-201ENST00000582241 73 ntBASIC24.26■■□□□ 1.47
NINLQ9Y2I6 AL589182.2-201ENST00000619332 1049 ntBASIC24.26■■□□□ 1.47
NINLQ9Y2I6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NINLQ9Y2I6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC24.26■■□□□ 1.47
NINLQ9Y2I6 AC148477.5-201ENST00000625164 1645 ntBASIC24.26■■□□□ 1.47
NINLQ9Y2I6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NINLQ9Y2I6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NINLQ9Y2I6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
NINLQ9Y2I6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC24.25■■□□□ 1.47
NINLQ9Y2I6 AP000997.3-201ENST00000623333 2250 ntBASIC24.25■■□□□ 1.47
NINLQ9Y2I6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
NINLQ9Y2I6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC24.25■■□□□ 1.47
NINLQ9Y2I6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
NINLQ9Y2I6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC24.25■■□□□ 1.47
NINLQ9Y2I6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
NINLQ9Y2I6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
NINLQ9Y2I6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
NINLQ9Y2I6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC24.25■■□□□ 1.47
NINLQ9Y2I6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
NINLQ9Y2I6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
NINLQ9Y2I6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC24.25■■□□□ 1.47
NINLQ9Y2I6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC24.25■■□□□ 1.47
NINLQ9Y2I6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
NINLQ9Y2I6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC24.25■■□□□ 1.47
NINLQ9Y2I6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
NINLQ9Y2I6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC24.25■■□□□ 1.47
NINLQ9Y2I6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
NINLQ9Y2I6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
NINLQ9Y2I6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NINLQ9Y2I6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC24.24■■□□□ 1.47
NINLQ9Y2I6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NINLQ9Y2I6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
NINLQ9Y2I6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC24.24■■□□□ 1.47
NINLQ9Y2I6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
NINLQ9Y2I6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC24.24■■□□□ 1.47
NINLQ9Y2I6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC24.24■■□□□ 1.47
NINLQ9Y2I6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC24.24■■□□□ 1.47
NINLQ9Y2I6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC24.24■■□□□ 1.47
NINLQ9Y2I6 TERC-201ENST00000602385 541 ntBASIC24.24■■□□□ 1.47
NINLQ9Y2I6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC24.24■■□□□ 1.47
NINLQ9Y2I6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC24.24■■□□□ 1.47
NINLQ9Y2I6 HLA-DQB1-201ENST00000374943 1656 ntBASIC24.24■■□□□ 1.47
NINLQ9Y2I6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
NINLQ9Y2I6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NINLQ9Y2I6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC24.23■■□□□ 1.47
NINLQ9Y2I6 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC24.23■■□□□ 1.47
NINLQ9Y2I6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC24.23■■□□□ 1.47
NINLQ9Y2I6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC24.23■■□□□ 1.47
NINLQ9Y2I6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
NINLQ9Y2I6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC24.23■■□□□ 1.47
NINLQ9Y2I6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC24.23■■□□□ 1.47
NINLQ9Y2I6 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC24.23■■□□□ 1.47
NINLQ9Y2I6 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC24.23■■□□□ 1.47
NINLQ9Y2I6 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC24.23■■□□□ 1.47
NINLQ9Y2I6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
NINLQ9Y2I6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NINLQ9Y2I6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NINLQ9Y2I6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
NINLQ9Y2I6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NINLQ9Y2I6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NINLQ9Y2I6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC24.23■■□□□ 1.47
NINLQ9Y2I6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NINLQ9Y2I6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
NINLQ9Y2I6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC24.23■■□□□ 1.47
NINLQ9Y2I6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC24.22■■□□□ 1.47
NINLQ9Y2I6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NINLQ9Y2I6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
NINLQ9Y2I6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC24.22■■□□□ 1.47
NINLQ9Y2I6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NINLQ9Y2I6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NINLQ9Y2I6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NINLQ9Y2I6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NINLQ9Y2I6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC24.22■■□□□ 1.47
NINLQ9Y2I6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NINLQ9Y2I6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC24.22■■□□□ 1.47
NINLQ9Y2I6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
NINLQ9Y2I6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
NINLQ9Y2I6 AC009113.1-201ENST00000570267 2443 ntBASIC24.22■■□□□ 1.47
NINLQ9Y2I6 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NINLQ9Y2I6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
NINLQ9Y2I6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC24.22■■□□□ 1.47
NINLQ9Y2I6 MYCLP1-201ENST00000372451 1075 ntBASIC24.22■■□□□ 1.47
NINLQ9Y2I6 AC073621.1-201ENST00000392730 636 ntBASIC24.22■■□□□ 1.47
NINLQ9Y2I6 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NINLQ9Y2I6 AC244107.1-201ENST00000442033 332 ntBASIC24.22■■□□□ 1.47
NINLQ9Y2I6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC24.22■■□□□ 1.47
NINLQ9Y2I6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC24.22■■□□□ 1.47
NINLQ9Y2I6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
NINLQ9Y2I6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NINLQ9Y2I6 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms