Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMC3Q9UQE7 CROCCP2-202ENST00000412962 2773 ntBASIC20.94■□□□□ 0.94
SMC3Q9UQE7 HLA-J-201ENST00000462773 1622 ntBASIC20.94■□□□□ 0.94
SMC3Q9UQE7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMC3Q9UQE7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.94■□□□□ 0.94
SMC3Q9UQE7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SMC3Q9UQE7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.94■□□□□ 0.94
SMC3Q9UQE7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.94■□□□□ 0.94
SMC3Q9UQE7 GCSHP2-201ENST00000560971 527 ntBASIC20.94■□□□□ 0.94
SMC3Q9UQE7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.94■□□□□ 0.94
SMC3Q9UQE7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.94■□□□□ 0.94
SMC3Q9UQE7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SMC3Q9UQE7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.94■□□□□ 0.94
SMC3Q9UQE7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMC3Q9UQE7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SMC3Q9UQE7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.94■□□□□ 0.94
SMC3Q9UQE7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMC3Q9UQE7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMC3Q9UQE7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMC3Q9UQE7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMC3Q9UQE7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.94■□□□□ 0.94
SMC3Q9UQE7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SMC3Q9UQE7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMC3Q9UQE7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMC3Q9UQE7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMC3Q9UQE7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMC3Q9UQE7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SMC3Q9UQE7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMC3Q9UQE7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.93■□□□□ 0.94
SMC3Q9UQE7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.93■□□□□ 0.94
SMC3Q9UQE7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.93■□□□□ 0.94
SMC3Q9UQE7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMC3Q9UQE7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMC3Q9UQE7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.93■□□□□ 0.94
SMC3Q9UQE7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.93■□□□□ 0.94
SMC3Q9UQE7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.93■□□□□ 0.94
SMC3Q9UQE7 AC024563.2-201ENST00000603282 481 ntBASIC20.93■□□□□ 0.94
SMC3Q9UQE7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.93■□□□□ 0.94
SMC3Q9UQE7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMC3Q9UQE7 KRT18P22-201ENST00000402024 1347 ntBASIC20.93■□□□□ 0.94
SMC3Q9UQE7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMC3Q9UQE7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SMC3Q9UQE7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.93■□□□□ 0.94
SMC3Q9UQE7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.93■□□□□ 0.94
SMC3Q9UQE7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMC3Q9UQE7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.93■□□□□ 0.94
SMC3Q9UQE7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 AP001094.4-201ENST00000579008 2176 ntBASIC20.92■□□□□ 0.94
SMC3Q9UQE7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 AC034232.1-201ENST00000506026 1064 ntBASIC20.92■□□□□ 0.94
SMC3Q9UQE7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.92■□□□□ 0.94
SMC3Q9UQE7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMC3Q9UQE7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMC3Q9UQE7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMC3Q9UQE7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMC3Q9UQE7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC20.91■□□□□ 0.94
SMC3Q9UQE7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMC3Q9UQE7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.91■□□□□ 0.94
SMC3Q9UQE7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SMC3Q9UQE7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMC3Q9UQE7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMC3Q9UQE7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMC3Q9UQE7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.91■□□□□ 0.94
SMC3Q9UQE7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.91■□□□□ 0.94
SMC3Q9UQE7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.91■□□□□ 0.94
SMC3Q9UQE7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.91■□□□□ 0.94
SMC3Q9UQE7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.91■□□□□ 0.94
SMC3Q9UQE7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.91■□□□□ 0.94
SMC3Q9UQE7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.91■□□□□ 0.94
SMC3Q9UQE7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.91■□□□□ 0.94
SMC3Q9UQE7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.91■□□□□ 0.94
SMC3Q9UQE7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms