Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 UPF3AP3-201ENST00000420996 769 ntBASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 MED15P5-201ENST00000423150 992 ntBASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 PMS2P2-201ENST00000425039 1128 ntBASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 DNAJB3-201ENST00000446806 729 ntBASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 MTDHP3-201ENST00000594186 672 ntBASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 AC140113.2-201ENST00000604370 208 ntBASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CDC42EP3Q9UKI2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 FGFR3P6-201ENST00000457012 610 ntBASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 AC145285.3-201ENST00000564603 959 ntBASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 AL049840.3-201ENST00000602669 611 ntBASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 AL355385.1-201ENST00000606123 409 ntBASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC42EP3Q9UKI2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 WIZP1-201ENST00000531444 2299 ntBASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 AC141586.3-201ENST00000562166 1838 ntBASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms