Protein–RNA interactions for Protein: Q9UI42

CPA4, Carboxypeptidase A4, humanhuman

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4Q9UI42 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPA4Q9UI42 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPA4Q9UI42 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPA4Q9UI42 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.19■□□□□ 0.82
CPA4Q9UI42 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPA4Q9UI42 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPA4Q9UI42 PAWRP1-201ENST00000451083 565 ntBASIC20.19■□□□□ 0.82
CPA4Q9UI42 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.19■□□□□ 0.82
CPA4Q9UI42 GREM1-201ENST00000560677 623 ntTSL 4 BASIC20.19■□□□□ 0.82
CPA4Q9UI42 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.19■□□□□ 0.82
CPA4Q9UI42 LSM12-202ENST00000585388 942 ntTSL 3 BASIC20.19■□□□□ 0.82
CPA4Q9UI42 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CPA4Q9UI42 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.19■□□□□ 0.82
CPA4Q9UI42 AC092902.6-201ENST00000641783 218 ntBASIC20.19■□□□□ 0.82
CPA4Q9UI42 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPA4Q9UI42 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
CPA4Q9UI42 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPA4Q9UI42 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPA4Q9UI42 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CPA4Q9UI42 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPA4Q9UI42 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPA4Q9UI42 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPA4Q9UI42 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPA4Q9UI42 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPA4Q9UI42 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
CPA4Q9UI42 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPA4Q9UI42 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CPA4Q9UI42 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
CPA4Q9UI42 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPA4Q9UI42 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPA4Q9UI42 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.18■□□□□ 0.82
CPA4Q9UI42 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPA4Q9UI42 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPA4Q9UI42 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPA4Q9UI42 AC093010.1-201ENST00000473625 1624 ntBASIC20.18■□□□□ 0.82
CPA4Q9UI42 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.18■□□□□ 0.82
CPA4Q9UI42 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPA4Q9UI42 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CPA4Q9UI42 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.18■□□□□ 0.82
CPA4Q9UI42 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPA4Q9UI42 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPA4Q9UI42 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.18■□□□□ 0.82
CPA4Q9UI42 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPA4Q9UI42 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.18■□□□□ 0.82
CPA4Q9UI42 AC105339.1-204ENST00000636249 355 ntBASIC20.18■□□□□ 0.82
CPA4Q9UI42 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CPA4Q9UI42 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPA4Q9UI42 PHGDH-209ENST00000641074 1780 ntBASIC20.18■□□□□ 0.82
CPA4Q9UI42 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPA4Q9UI42 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
CPA4Q9UI42 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPA4Q9UI42 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPA4Q9UI42 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CPA4Q9UI42 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPA4Q9UI42 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPA4Q9UI42 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
CPA4Q9UI42 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.17■□□□□ 0.82
CPA4Q9UI42 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPA4Q9UI42 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPA4Q9UI42 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPA4Q9UI42 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.17■□□□□ 0.82
CPA4Q9UI42 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.17■□□□□ 0.82
CPA4Q9UI42 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPA4Q9UI42 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.17■□□□□ 0.82
CPA4Q9UI42 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.17■□□□□ 0.82
CPA4Q9UI42 AC109322.1-201ENST00000524499 1264 ntBASIC20.17■□□□□ 0.82
CPA4Q9UI42 DAD1-205ENST00000543337 501 ntTSL 3 BASIC20.17■□□□□ 0.82
CPA4Q9UI42 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
CPA4Q9UI42 AC005498.2-205ENST00000593218 784 ntBASIC20.17■□□□□ 0.82
CPA4Q9UI42 AC023141.13-201ENST00000604991 943 ntBASIC20.17■□□□□ 0.82
CPA4Q9UI42 AC007064.4-201ENST00000637740 555 ntBASIC20.17■□□□□ 0.82
CPA4Q9UI42 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPA4Q9UI42 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPA4Q9UI42 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.17■□□□□ 0.82
CPA4Q9UI42 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPA4Q9UI42 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CPA4Q9UI42 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPA4Q9UI42 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPA4Q9UI42 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.17■□□□□ 0.82
CPA4Q9UI42 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPA4Q9UI42 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPA4Q9UI42 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPA4Q9UI42 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.17■□□□□ 0.82
CPA4Q9UI42 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPA4Q9UI42 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPA4Q9UI42 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CPA4Q9UI42 AC097637.2-201ENST00000624096 1997 ntBASIC20.16■□□□□ 0.82
CPA4Q9UI42 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CPA4Q9UI42 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC20.16■□□□□ 0.82
CPA4Q9UI42 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.16■□□□□ 0.82
CPA4Q9UI42 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CPA4Q9UI42 HLA-DRB6-201ENST00000411500 1235 ntBASIC20.16■□□□□ 0.82
CPA4Q9UI42 HLA-J-203ENST00000494367 1087 ntBASIC20.16■□□□□ 0.82
CPA4Q9UI42 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPA4Q9UI42 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20.16■□□□□ 0.82
CPA4Q9UI42 AC109462.3-201ENST00000573934 613 ntBASIC20.16■□□□□ 0.82
CPA4Q9UI42 AC138761.1-201ENST00000584393 385 ntBASIC20.16■□□□□ 0.82
CPA4Q9UI42 INO80C-206ENST00000586489 594 ntTSL 3 BASIC20.16■□□□□ 0.82
CPA4Q9UI42 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.16■□□□□ 0.82
CPA4Q9UI42 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms