Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC27.96■■■□□ 2.07
RIMBP3Q9UFD9 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
RIMBP3Q9UFD9 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
RIMBP3Q9UFD9 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC27.96■■■□□ 2.07
RIMBP3Q9UFD9 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
RIMBP3Q9UFD9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC27.96■■■□□ 2.07
RIMBP3Q9UFD9 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
RIMBP3Q9UFD9 HNRNPA3P1-201ENST00000401429 1139 ntBASIC27.96■■■□□ 2.07
RIMBP3Q9UFD9 HNRNPA3P5-201ENST00000455201 833 ntBASIC27.96■■■□□ 2.07
RIMBP3Q9UFD9 LY6E-204ENST00000519546 971 ntTSL 2 BASIC27.96■■■□□ 2.07
RIMBP3Q9UFD9 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC27.96■■■□□ 2.07
RIMBP3Q9UFD9 AC008738.7-201ENST00000609744 511 ntBASIC27.96■■■□□ 2.07
RIMBP3Q9UFD9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC27.96■■■□□ 2.07
RIMBP3Q9UFD9 AC097637.2-201ENST00000624096 1997 ntBASIC27.96■■■□□ 2.07
RIMBP3Q9UFD9 AC099778.1-201ENST00000568593 1911 ntBASIC27.95■■■□□ 2.07
RIMBP3Q9UFD9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC27.95■■■□□ 2.07
RIMBP3Q9UFD9 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
RIMBP3Q9UFD9 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
RIMBP3Q9UFD9 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC27.95■■■□□ 2.06
RIMBP3Q9UFD9 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
RIMBP3Q9UFD9 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC27.95■■■□□ 2.06
RIMBP3Q9UFD9 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
RIMBP3Q9UFD9 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
RIMBP3Q9UFD9 LINC00982-205ENST00000420957 435 ntBASIC27.95■■■□□ 2.06
RIMBP3Q9UFD9 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC27.95■■■□□ 2.06
RIMBP3Q9UFD9 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC27.95■■■□□ 2.06
RIMBP3Q9UFD9 AC004840.1-201ENST00000636359 365 ntBASIC27.95■■■□□ 2.06
RIMBP3Q9UFD9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
RIMBP3Q9UFD9 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
RIMBP3Q9UFD9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC27.94■■■□□ 2.06
RIMBP3Q9UFD9 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC27.94■■■□□ 2.06
RIMBP3Q9UFD9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC27.94■■■□□ 2.06
RIMBP3Q9UFD9 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
RIMBP3Q9UFD9 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
RIMBP3Q9UFD9 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC27.94■■■□□ 2.06
RIMBP3Q9UFD9 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC27.94■■■□□ 2.06
RIMBP3Q9UFD9 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC27.94■■■□□ 2.06
RIMBP3Q9UFD9 AC104794.3-201ENST00000566840 1248 ntBASIC27.94■■■□□ 2.06
RIMBP3Q9UFD9 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC27.94■■■□□ 2.06
RIMBP3Q9UFD9 AL512343.1-201ENST00000605837 169 ntBASIC27.94■■■□□ 2.06
RIMBP3Q9UFD9 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
RIMBP3Q9UFD9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
RIMBP3Q9UFD9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC27.94■■■□□ 2.06
RIMBP3Q9UFD9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC27.93■■■□□ 2.06
RIMBP3Q9UFD9 TMEM14DP-201ENST00000422205 345 ntBASIC27.93■■■□□ 2.06
RIMBP3Q9UFD9 MIR4453-201ENST00000584019 89 ntBASIC27.93■■■□□ 2.06
RIMBP3Q9UFD9 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
RIMBP3Q9UFD9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC27.93■■■□□ 2.06
RIMBP3Q9UFD9 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
RIMBP3Q9UFD9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
RIMBP3Q9UFD9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
RIMBP3Q9UFD9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
RIMBP3Q9UFD9 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC27.93■■■□□ 2.06
RIMBP3Q9UFD9 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
RIMBP3Q9UFD9 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC27.92■■■□□ 2.06
RIMBP3Q9UFD9 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
RIMBP3Q9UFD9 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
RIMBP3Q9UFD9 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
RIMBP3Q9UFD9 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
RIMBP3Q9UFD9 AP005482.1-201ENST00000563722 1273 ntBASIC27.92■■■□□ 2.06
RIMBP3Q9UFD9 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC27.92■■■□□ 2.06
RIMBP3Q9UFD9 AL138828.2-201ENST00000615812 383 ntBASIC27.92■■■□□ 2.06
RIMBP3Q9UFD9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
RIMBP3Q9UFD9 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
RIMBP3Q9UFD9 MYLKP1-201ENST00000509077 1580 ntBASIC27.92■■■□□ 2.06
RIMBP3Q9UFD9 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
RIMBP3Q9UFD9 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
RIMBP3Q9UFD9 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
RIMBP3Q9UFD9 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC27.92■■■□□ 2.06
RIMBP3Q9UFD9 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
RIMBP3Q9UFD9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
RIMBP3Q9UFD9 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
RIMBP3Q9UFD9 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
RIMBP3Q9UFD9 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC27.92■■■□□ 2.06
RIMBP3Q9UFD9 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC27.92■■■□□ 2.06
RIMBP3Q9UFD9 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC27.92■■■□□ 2.06
RIMBP3Q9UFD9 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC27.92■■■□□ 2.06
RIMBP3Q9UFD9 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC27.92■■■□□ 2.06
RIMBP3Q9UFD9 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC27.92■■■□□ 2.06
RIMBP3Q9UFD9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC27.91■■■□□ 2.06
RIMBP3Q9UFD9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC27.91■■■□□ 2.06
RIMBP3Q9UFD9 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
RIMBP3Q9UFD9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC27.91■■■□□ 2.06
RIMBP3Q9UFD9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
RIMBP3Q9UFD9 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
RIMBP3Q9UFD9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC27.91■■■□□ 2.06
RIMBP3Q9UFD9 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
RIMBP3Q9UFD9 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC27.91■■■□□ 2.06
RIMBP3Q9UFD9 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC27.91■■■□□ 2.06
RIMBP3Q9UFD9 COX5BP2-201ENST00000392354 334 ntBASIC27.91■■■□□ 2.06
RIMBP3Q9UFD9 BNIP3P42-201ENST00000454982 569 ntBASIC27.91■■■□□ 2.06
RIMBP3Q9UFD9 RN7SL837P-201ENST00000463010 287 ntBASIC27.91■■■□□ 2.06
RIMBP3Q9UFD9 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC27.91■■■□□ 2.06
RIMBP3Q9UFD9 BNIP3P29-201ENST00000598302 571 ntBASIC27.91■■■□□ 2.06
RIMBP3Q9UFD9 AC011447.5-201ENST00000616168 564 ntBASIC27.91■■■□□ 2.06
RIMBP3Q9UFD9 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC27.91■■■□□ 2.06
RIMBP3Q9UFD9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC27.91■■■□□ 2.06
RIMBP3Q9UFD9 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC27.91■■■□□ 2.06
RIMBP3Q9UFD9 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
RIMBP3Q9UFD9 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC27.91■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms