Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNTN3Q9P232 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CNTN3Q9P232 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNTN3Q9P232 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNTN3Q9P232 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CNTN3Q9P232 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.14■□□□□ 0.65
CNTN3Q9P232 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.14■□□□□ 0.65
CNTN3Q9P232 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNTN3Q9P232 KRT18P67-201ENST00000432816 1264 ntBASIC19.14■□□□□ 0.65
CNTN3Q9P232 AC103564.2-201ENST00000432853 1299 ntBASIC19.14■□□□□ 0.65
CNTN3Q9P232 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNTN3Q9P232 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.14■□□□□ 0.65
CNTN3Q9P232 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
CNTN3Q9P232 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.14■□□□□ 0.65
CNTN3Q9P232 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CNTN3Q9P232 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNTN3Q9P232 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.14■□□□□ 0.65
CNTN3Q9P232 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNTN3Q9P232 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.14■□□□□ 0.65
CNTN3Q9P232 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNTN3Q9P232 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.14■□□□□ 0.65
CNTN3Q9P232 PMPCAP1-201ENST00000508114 1576 ntBASIC19.14■□□□□ 0.65
CNTN3Q9P232 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.14■□□□□ 0.65
CNTN3Q9P232 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNTN3Q9P232 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.14■□□□□ 0.65
CNTN3Q9P232 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.13■□□□□ 0.65
CNTN3Q9P232 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTN3Q9P232 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTN3Q9P232 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNTN3Q9P232 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTN3Q9P232 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CNTN3Q9P232 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNTN3Q9P232 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CNTN3Q9P232 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTN3Q9P232 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTN3Q9P232 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTN3Q9P232 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.13■□□□□ 0.65
CNTN3Q9P232 SCARNA2-201ENST00000458748 420 ntBASIC19.13■□□□□ 0.65
CNTN3Q9P232 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.13■□□□□ 0.65
CNTN3Q9P232 AC064862.7-201ENST00000604520 867 ntBASIC19.13■□□□□ 0.65
CNTN3Q9P232 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.13■□□□□ 0.65
CNTN3Q9P232 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CNTN3Q9P232 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTN3Q9P232 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNTN3Q9P232 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTN3Q9P232 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CNTN3Q9P232 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNTN3Q9P232 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.13■□□□□ 0.65
CNTN3Q9P232 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.13■□□□□ 0.65
CNTN3Q9P232 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTN3Q9P232 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.13■□□□□ 0.65
CNTN3Q9P232 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTN3Q9P232 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
CNTN3Q9P232 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.12■□□□□ 0.65
CNTN3Q9P232 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTN3Q9P232 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.12■□□□□ 0.65
CNTN3Q9P232 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTN3Q9P232 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.12■□□□□ 0.65
CNTN3Q9P232 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.12■□□□□ 0.65
CNTN3Q9P232 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNTN3Q9P232 BX276092.7-203ENST00000637198 1536 ntBASIC19.12■□□□□ 0.65
CNTN3Q9P232 HLA-A-201ENST00000376802 1334 ntBASIC19.12■□□□□ 0.65
CNTN3Q9P232 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.12■□□□□ 0.65
CNTN3Q9P232 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.12■□□□□ 0.65
CNTN3Q9P232 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTN3Q9P232 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.12■□□□□ 0.65
CNTN3Q9P232 AC018712.1-201ENST00000455767 687 ntBASIC19.12■□□□□ 0.65
CNTN3Q9P232 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.12■□□□□ 0.65
CNTN3Q9P232 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.12■□□□□ 0.65
CNTN3Q9P232 RNA5SP419-201ENST00000515908 135 ntBASIC19.12■□□□□ 0.65
CNTN3Q9P232 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.12■□□□□ 0.65
CNTN3Q9P232 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.12■□□□□ 0.65
CNTN3Q9P232 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNTN3Q9P232 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNTN3Q9P232 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNTN3Q9P232 AL139288.1-201ENST00000623748 933 ntBASIC19.12■□□□□ 0.65
CNTN3Q9P232 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNTN3Q9P232 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CNTN3Q9P232 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNTN3Q9P232 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNTN3Q9P232 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNTN3Q9P232 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTN3Q9P232 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.12■□□□□ 0.65
CNTN3Q9P232 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTN3Q9P232 AL356309.3-201ENST00000624132 1934 ntBASIC19.12■□□□□ 0.65
CNTN3Q9P232 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNTN3Q9P232 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNTN3Q9P232 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTN3Q9P232 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.11■□□□□ 0.65
CNTN3Q9P232 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.11■□□□□ 0.65
CNTN3Q9P232 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.11■□□□□ 0.65
CNTN3Q9P232 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTN3Q9P232 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTN3Q9P232 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTN3Q9P232 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTN3Q9P232 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTN3Q9P232 NOC2LP1-202ENST00000452600 2235 ntBASIC19.11■□□□□ 0.65
CNTN3Q9P232 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.11■□□□□ 0.65
CNTN3Q9P232 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTN3Q9P232 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms