Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC25.31■■□□□ 1.64
SLC52A1Q9NWF4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SLC52A1Q9NWF4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SLC52A1Q9NWF4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC25.31■■□□□ 1.64
SLC52A1Q9NWF4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
SLC52A1Q9NWF4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SLC52A1Q9NWF4 CALY-203ENST00000368558 825 ntTSL 5 BASIC25.31■■□□□ 1.64
SLC52A1Q9NWF4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC25.31■■□□□ 1.64
SLC52A1Q9NWF4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC25.31■■□□□ 1.64
SLC52A1Q9NWF4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
SLC52A1Q9NWF4 AC004835.2-201ENST00000603762 682 ntBASIC25.31■■□□□ 1.64
SLC52A1Q9NWF4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC25.31■■□□□ 1.64
SLC52A1Q9NWF4 AC105339.1-204ENST00000636249 355 ntBASIC25.31■■□□□ 1.64
SLC52A1Q9NWF4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SLC52A1Q9NWF4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SLC52A1Q9NWF4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
SLC52A1Q9NWF4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SLC52A1Q9NWF4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SLC52A1Q9NWF4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SLC52A1Q9NWF4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC25.31■■□□□ 1.64
SLC52A1Q9NWF4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
SLC52A1Q9NWF4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
SLC52A1Q9NWF4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SLC52A1Q9NWF4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SLC52A1Q9NWF4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SLC52A1Q9NWF4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC25.3■■□□□ 1.64
SLC52A1Q9NWF4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC25.3■■□□□ 1.64
SLC52A1Q9NWF4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SLC52A1Q9NWF4 DDT-204ENST00000404092 805 ntTSL 3 BASIC25.3■■□□□ 1.64
SLC52A1Q9NWF4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC25.3■■□□□ 1.64
SLC52A1Q9NWF4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
SLC52A1Q9NWF4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC25.3■■□□□ 1.64
SLC52A1Q9NWF4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC25.3■■□□□ 1.64
SLC52A1Q9NWF4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC25.3■■□□□ 1.64
SLC52A1Q9NWF4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC25.3■■□□□ 1.64
SLC52A1Q9NWF4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC25.3■■□□□ 1.64
SLC52A1Q9NWF4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
SLC52A1Q9NWF4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
SLC52A1Q9NWF4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
SLC52A1Q9NWF4 AL121761.2-201ENST00000598007 1648 ntBASIC25.3■■□□□ 1.64
SLC52A1Q9NWF4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC25.3■■□□□ 1.64
SLC52A1Q9NWF4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SLC52A1Q9NWF4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC25.29■■□□□ 1.64
SLC52A1Q9NWF4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC25.29■■□□□ 1.64
SLC52A1Q9NWF4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SLC52A1Q9NWF4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC25.29■■□□□ 1.64
SLC52A1Q9NWF4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
SLC52A1Q9NWF4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SLC52A1Q9NWF4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SLC52A1Q9NWF4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC25.29■■□□□ 1.64
SLC52A1Q9NWF4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
SLC52A1Q9NWF4 HLA-J-203ENST00000494367 1087 ntBASIC25.29■■□□□ 1.64
SLC52A1Q9NWF4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC25.29■■□□□ 1.64
SLC52A1Q9NWF4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC25.29■■□□□ 1.64
SLC52A1Q9NWF4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC25.29■■□□□ 1.64
SLC52A1Q9NWF4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC25.29■■□□□ 1.64
SLC52A1Q9NWF4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
SLC52A1Q9NWF4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SLC52A1Q9NWF4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SLC52A1Q9NWF4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SLC52A1Q9NWF4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SLC52A1Q9NWF4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SLC52A1Q9NWF4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC25.29■■□□□ 1.64
SLC52A1Q9NWF4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SLC52A1Q9NWF4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
SLC52A1Q9NWF4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SLC52A1Q9NWF4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SLC52A1Q9NWF4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SLC52A1Q9NWF4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC25.29■■□□□ 1.64
SLC52A1Q9NWF4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC25.28■■□□□ 1.64
SLC52A1Q9NWF4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
SLC52A1Q9NWF4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SLC52A1Q9NWF4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
SLC52A1Q9NWF4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SLC52A1Q9NWF4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SLC52A1Q9NWF4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
SLC52A1Q9NWF4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SLC52A1Q9NWF4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC25.28■■□□□ 1.64
SLC52A1Q9NWF4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC25.28■■□□□ 1.64
SLC52A1Q9NWF4 AC004461.1-201ENST00000412461 403 ntBASIC25.28■■□□□ 1.64
SLC52A1Q9NWF4 CXCL1P1-201ENST00000502804 216 ntBASIC25.28■■□□□ 1.64
SLC52A1Q9NWF4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC25.28■■□□□ 1.64
SLC52A1Q9NWF4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC25.28■■□□□ 1.64
SLC52A1Q9NWF4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SLC52A1Q9NWF4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC25.28■■□□□ 1.64
SLC52A1Q9NWF4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC25.28■■□□□ 1.64
SLC52A1Q9NWF4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC25.28■■□□□ 1.64
SLC52A1Q9NWF4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC25.28■■□□□ 1.64
SLC52A1Q9NWF4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SLC52A1Q9NWF4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SLC52A1Q9NWF4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SLC52A1Q9NWF4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC25.27■■□□□ 1.64
SLC52A1Q9NWF4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SLC52A1Q9NWF4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC25.27■■□□□ 1.64
SLC52A1Q9NWF4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC25.27■■□□□ 1.64
SLC52A1Q9NWF4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SLC52A1Q9NWF4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SLC52A1Q9NWF4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
SLC52A1Q9NWF4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SLC52A1Q9NWF4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms