Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.46■■□□□ 1.03
FOXD4L1Q9NU39 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FOXD4L1Q9NU39 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
FOXD4L1Q9NU39 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC21.46■■□□□ 1.03
FOXD4L1Q9NU39 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC21.46■■□□□ 1.03
FOXD4L1Q9NU39 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.03
FOXD4L1Q9NU39 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
FOXD4L1Q9NU39 KRT18P55-202ENST00000578578 1546 ntBASIC21.45■■□□□ 1.02
FOXD4L1Q9NU39 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
FOXD4L1Q9NU39 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
FOXD4L1Q9NU39 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
FOXD4L1Q9NU39 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXD4L1Q9NU39 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXD4L1Q9NU39 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.45■■□□□ 1.02
FOXD4L1Q9NU39 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.45■■□□□ 1.02
FOXD4L1Q9NU39 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.45■■□□□ 1.02
FOXD4L1Q9NU39 KRT18P23-201ENST00000435622 1283 ntBASIC21.45■■□□□ 1.02
FOXD4L1Q9NU39 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.45■■□□□ 1.02
FOXD4L1Q9NU39 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.45■■□□□ 1.02
FOXD4L1Q9NU39 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.45■■□□□ 1.02
FOXD4L1Q9NU39 AP001198.2-201ENST00000593121 466 ntTSL 2 BASIC21.45■■□□□ 1.02
FOXD4L1Q9NU39 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC21.45■■□□□ 1.02
FOXD4L1Q9NU39 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXD4L1Q9NU39 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
FOXD4L1Q9NU39 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXD4L1Q9NU39 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
FOXD4L1Q9NU39 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.45■■□□□ 1.02
FOXD4L1Q9NU39 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
FOXD4L1Q9NU39 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
FOXD4L1Q9NU39 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
FOXD4L1Q9NU39 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
FOXD4L1Q9NU39 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 AC008894.3-201ENST00000624324 3103 ntBASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 HR-201ENST00000312841 5351 ntTSL 5 BASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 AC073310.1-201ENST00000423226 1033 ntBASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 CD99P1-205ENST00000527459 561 ntBASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 KCTD14-202ENST00000533144 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 AL450472.2-201ENST00000603663 1156 ntBASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 NKILA-202ENST00000614771 2598 ntBASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXD4L1Q9NU39 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 AC021546.1-201ENST00000518927 1031 ntTSL 3 BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXD4L1Q9NU39 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms