Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 KRT18P55-202ENST00000578578 1546 ntBASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 CROCCP1-201ENST00000426910 5675 ntBASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 RCN1P1-201ENST00000400413 996 ntBASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 AC034232.1-201ENST00000506026 1064 ntBASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 AC006011.2-201ENST00000621313 1158 ntBASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 AC080080.1-201ENST00000625121 2420 ntBASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 AL645608.8-201ENST00000606034 2086 ntBASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 AC141586.5-201ENST00000624546 2050 ntBASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTPS2Q9NRF8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 AL355312.1-201ENST00000407115 2176 ntBASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS2Q9NRF8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms