Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 AL671277.1-201ENST00000429656 993 ntBASIC16.4■□□□□ 0.22
CHD8Q9HCK8 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 AL158211.3-201ENST00000607385 239 ntBASIC16.4■□□□□ 0.22
CHD8Q9HCK8 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 COX11-210ENST00000639671 696 ntBASIC16.4■□□□□ 0.22
CHD8Q9HCK8 AL353593.2-201ENST00000602529 1483 ntBASIC16.4■□□□□ 0.22
CHD8Q9HCK8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 AKAP8P1-201ENST00000434743 1349 ntBASIC16.4■□□□□ 0.22
CHD8Q9HCK8 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.4■□□□□ 0.22
CHD8Q9HCK8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CHD8Q9HCK8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.39■□□□□ 0.22
CHD8Q9HCK8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
CHD8Q9HCK8 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CHD8Q9HCK8 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
CHD8Q9HCK8 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.39■□□□□ 0.22
CHD8Q9HCK8 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.39■□□□□ 0.22
CHD8Q9HCK8 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.39■□□□□ 0.22
CHD8Q9HCK8 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.39■□□□□ 0.22
CHD8Q9HCK8 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.39■□□□□ 0.22
CHD8Q9HCK8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHD8Q9HCK8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHD8Q9HCK8 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CHD8Q9HCK8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHD8Q9HCK8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHD8Q9HCK8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHD8Q9HCK8 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHD8Q9HCK8 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.39■□□□□ 0.21
CHD8Q9HCK8 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.39■□□□□ 0.21
CHD8Q9HCK8 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHD8Q9HCK8 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CHD8Q9HCK8 RNA5SP423-201ENST00000517127 109 ntBASIC16.39■□□□□ 0.21
CHD8Q9HCK8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.39■□□□□ 0.21
CHD8Q9HCK8 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
CHD8Q9HCK8 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CHD8Q9HCK8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CHD8Q9HCK8 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHD8Q9HCK8 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CHD8Q9HCK8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHD8Q9HCK8 AC007375.3-201ENST00000600936 2314 ntBASIC16.39■□□□□ 0.21
CHD8Q9HCK8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CHD8Q9HCK8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.39■□□□□ 0.21
CHD8Q9HCK8 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHD8Q9HCK8 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHD8Q9HCK8 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHD8Q9HCK8 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.38■□□□□ 0.21
CHD8Q9HCK8 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.38■□□□□ 0.21
CHD8Q9HCK8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD8Q9HCK8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD8Q9HCK8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.38■□□□□ 0.21
CHD8Q9HCK8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CHD8Q9HCK8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD8Q9HCK8 RN7SL589P-201ENST00000481268 310 ntBASIC16.38■□□□□ 0.21
CHD8Q9HCK8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD8Q9HCK8 FP475955.4-201ENST00000623131 1990 ntBASIC16.38■□□□□ 0.21
CHD8Q9HCK8 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHD8Q9HCK8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CHD8Q9HCK8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHD8Q9HCK8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD8Q9HCK8 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD8Q9HCK8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
CHD8Q9HCK8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.38■□□□□ 0.21
CHD8Q9HCK8 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.38■□□□□ 0.21
CHD8Q9HCK8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.38■□□□□ 0.21
CHD8Q9HCK8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD8Q9HCK8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
CHD8Q9HCK8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD8Q9HCK8 AC112492.5-201ENST00000421897 457 ntBASIC16.37■□□□□ 0.21
CHD8Q9HCK8 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.37■□□□□ 0.21
CHD8Q9HCK8 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.37■□□□□ 0.21
CHD8Q9HCK8 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CHD8Q9HCK8 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CHD8Q9HCK8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CHD8Q9HCK8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.37■□□□□ 0.21
CHD8Q9HCK8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.37■□□□□ 0.21
CHD8Q9HCK8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD8Q9HCK8 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.37■□□□□ 0.21
CHD8Q9HCK8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD8Q9HCK8 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHD8Q9HCK8 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CHD8Q9HCK8 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHD8Q9HCK8 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD8Q9HCK8 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHD8Q9HCK8 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHD8Q9HCK8 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms