Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 KRT18P31-201ENST00000506277 1292 ntBASIC21■□□□□ 0.95
RNF41Q9H4P4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF41Q9H4P4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21■□□□□ 0.95
RNF41Q9H4P4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21■□□□□ 0.95
RNF41Q9H4P4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC21■□□□□ 0.95
RNF41Q9H4P4 AC091304.2-201ENST00000564639 760 ntBASIC21■□□□□ 0.95
RNF41Q9H4P4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21■□□□□ 0.95
RNF41Q9H4P4 MIR5100-201ENST00000579544 119 ntBASIC21■□□□□ 0.95
RNF41Q9H4P4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC21■□□□□ 0.95
RNF41Q9H4P4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21■□□□□ 0.95
RNF41Q9H4P4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21■□□□□ 0.95
RNF41Q9H4P4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
RNF41Q9H4P4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21■□□□□ 0.95
RNF41Q9H4P4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF41Q9H4P4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF41Q9H4P4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC21■□□□□ 0.95
RNF41Q9H4P4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
RNF41Q9H4P4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF41Q9H4P4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF41Q9H4P4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21■□□□□ 0.95
RNF41Q9H4P4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC21■□□□□ 0.95
RNF41Q9H4P4 AC008764.6-201ENST00000595909 2069 ntBASIC21■□□□□ 0.95
RNF41Q9H4P4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF41Q9H4P4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 HTR7P1-202ENST00000624664 4411 ntBASIC20.99■□□□□ 0.95
RNF41Q9H4P4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF41Q9H4P4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.98■□□□□ 0.95
RNF41Q9H4P4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF41Q9H4P4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RNF41Q9H4P4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF41Q9H4P4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF41Q9H4P4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF41Q9H4P4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF41Q9H4P4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF41Q9H4P4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.98■□□□□ 0.95
RNF41Q9H4P4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF41Q9H4P4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF41Q9H4P4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.98■□□□□ 0.95
RNF41Q9H4P4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.98■□□□□ 0.95
RNF41Q9H4P4 AL591684.3-201ENST00000605187 298 ntBASIC20.98■□□□□ 0.95
RNF41Q9H4P4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF41Q9H4P4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
RNF41Q9H4P4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF41Q9H4P4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.98■□□□□ 0.95
RNF41Q9H4P4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF41Q9H4P4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RNF41Q9H4P4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF41Q9H4P4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF41Q9H4P4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
RNF41Q9H4P4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF41Q9H4P4 AC006116.8-202ENST00000587620 1550 ntBASIC20.97■□□□□ 0.95
RNF41Q9H4P4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF41Q9H4P4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF41Q9H4P4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF41Q9H4P4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF41Q9H4P4 AC090340.1-201ENST00000620778 4980 ntBASIC20.97■□□□□ 0.95
RNF41Q9H4P4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RNF41Q9H4P4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF41Q9H4P4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF41Q9H4P4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RNF41Q9H4P4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF41Q9H4P4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF41Q9H4P4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF41Q9H4P4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
RNF41Q9H4P4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF41Q9H4P4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF41Q9H4P4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.97■□□□□ 0.95
RNF41Q9H4P4 LINC01711-201ENST00000598340 967 ntBASIC20.97■□□□□ 0.95
RNF41Q9H4P4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms