Protein–RNA interactions for Protein: Q9H2X0

CHRD, Chordin, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDQ9H2X0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CHRDQ9H2X0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHRDQ9H2X0 BCAR1-209ENST00000546196 1340 ntBASIC17.78■□□□□ 0.44
CHRDQ9H2X0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRDQ9H2X0 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRDQ9H2X0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.78■□□□□ 0.44
CHRDQ9H2X0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CHRDQ9H2X0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRDQ9H2X0 FAM58CP-201ENST00000435741 640 ntBASIC17.78■□□□□ 0.44
CHRDQ9H2X0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.78■□□□□ 0.44
CHRDQ9H2X0 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CHRDQ9H2X0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.78■□□□□ 0.44
CHRDQ9H2X0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.78■□□□□ 0.44
CHRDQ9H2X0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CHRDQ9H2X0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.78■□□□□ 0.44
CHRDQ9H2X0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRDQ9H2X0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.78■□□□□ 0.44
CHRDQ9H2X0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHRDQ9H2X0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CHRDQ9H2X0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CHRDQ9H2X0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CHRDQ9H2X0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.77■□□□□ 0.44
CHRDQ9H2X0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRDQ9H2X0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.77■□□□□ 0.44
CHRDQ9H2X0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHRDQ9H2X0 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHRDQ9H2X0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CHRDQ9H2X0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CHRDQ9H2X0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
CHRDQ9H2X0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRDQ9H2X0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRDQ9H2X0 AL139400.1-201ENST00000366220 510 ntBASIC17.77■□□□□ 0.44
CHRDQ9H2X0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHRDQ9H2X0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRDQ9H2X0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CHRDQ9H2X0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.77■□□□□ 0.44
CHRDQ9H2X0 RHOQP3-201ENST00000437982 621 ntBASIC17.77■□□□□ 0.44
CHRDQ9H2X0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.77■□□□□ 0.44
CHRDQ9H2X0 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.77■□□□□ 0.44
CHRDQ9H2X0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CHRDQ9H2X0 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.77■□□□□ 0.44
CHRDQ9H2X0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CHRDQ9H2X0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.77■□□□□ 0.44
CHRDQ9H2X0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CHRDQ9H2X0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.77■□□□□ 0.44
CHRDQ9H2X0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHRDQ9H2X0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CHRDQ9H2X0 ESPNP-201ENST00000270691 2015 ntBASIC17.77■□□□□ 0.43
CHRDQ9H2X0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.77■□□□□ 0.43
CHRDQ9H2X0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHRDQ9H2X0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.77■□□□□ 0.43
CHRDQ9H2X0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CHRDQ9H2X0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHRDQ9H2X0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
CHRDQ9H2X0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 BCRP1-201ENST00000444246 691 ntBASIC17.76■□□□□ 0.43
CHRDQ9H2X0 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 AL096865.1-201ENST00000606796 927 ntBASIC17.76■□□□□ 0.43
CHRDQ9H2X0 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.76■□□□□ 0.43
CHRDQ9H2X0 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRDQ9H2X0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHRDQ9H2X0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms