Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN18Q99952 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.28■□□□□ 0.84
PTPN18Q99952 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN18Q99952 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.28■□□□□ 0.84
PTPN18Q99952 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN18Q99952 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN18Q99952 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.27■□□□□ 0.84
PTPN18Q99952 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.27■□□□□ 0.84
PTPN18Q99952 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN18Q99952 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN18Q99952 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN18Q99952 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
PTPN18Q99952 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN18Q99952 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN18Q99952 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.27■□□□□ 0.84
PTPN18Q99952 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN18Q99952 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN18Q99952 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN18Q99952 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN18Q99952 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN18Q99952 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.27■□□□□ 0.84
PTPN18Q99952 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.27■□□□□ 0.84
PTPN18Q99952 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.27■□□□□ 0.84
PTPN18Q99952 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.27■□□□□ 0.84
PTPN18Q99952 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20.27■□□□□ 0.84
PTPN18Q99952 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC20.27■□□□□ 0.84
PTPN18Q99952 DUX4L27-201ENST00000554796 1261 ntBASIC20.27■□□□□ 0.84
PTPN18Q99952 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.27■□□□□ 0.84
PTPN18Q99952 AC109462.3-201ENST00000573934 613 ntBASIC20.27■□□□□ 0.84
PTPN18Q99952 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.27■□□□□ 0.84
PTPN18Q99952 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN18Q99952 AC068137.2-201ENST00000605408 478 ntBASIC20.27■□□□□ 0.84
PTPN18Q99952 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PTPN18Q99952 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.27■□□□□ 0.84
PTPN18Q99952 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN18Q99952 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.27■□□□□ 0.84
PTPN18Q99952 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.27■□□□□ 0.84
PTPN18Q99952 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
PTPN18Q99952 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTPN18Q99952 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PTPN18Q99952 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PTPN18Q99952 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.27■□□□□ 0.83
PTPN18Q99952 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTPN18Q99952 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.26■□□□□ 0.83
PTPN18Q99952 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.26■□□□□ 0.83
PTPN18Q99952 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN18Q99952 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN18Q99952 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.26■□□□□ 0.83
PTPN18Q99952 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN18Q99952 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.26■□□□□ 0.83
PTPN18Q99952 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN18Q99952 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN18Q99952 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC20.26■□□□□ 0.83
PTPN18Q99952 LINC00982-205ENST00000420957 435 ntBASIC20.26■□□□□ 0.83
PTPN18Q99952 AC015922.1-201ENST00000421102 1152 ntBASIC20.26■□□□□ 0.83
PTPN18Q99952 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20.26■□□□□ 0.83
PTPN18Q99952 CXCL1P1-201ENST00000502804 216 ntBASIC20.26■□□□□ 0.83
PTPN18Q99952 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.26■□□□□ 0.83
PTPN18Q99952 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC20.26■□□□□ 0.83
PTPN18Q99952 AC190387.1-201ENST00000551683 408 ntBASIC20.26■□□□□ 0.83
PTPN18Q99952 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.26■□□□□ 0.83
PTPN18Q99952 STK25P1-201ENST00000585406 838 ntBASIC20.26■□□□□ 0.83
PTPN18Q99952 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN18Q99952 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC20.26■□□□□ 0.83
PTPN18Q99952 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.26■□□□□ 0.83
PTPN18Q99952 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.26■□□□□ 0.83
PTPN18Q99952 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.26■□□□□ 0.83
PTPN18Q99952 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN18Q99952 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN18Q99952 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.26■□□□□ 0.83
PTPN18Q99952 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.26■□□□□ 0.83
PTPN18Q99952 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PTPN18Q99952 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN18Q99952 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN18Q99952 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN18Q99952 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN18Q99952 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
PTPN18Q99952 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN18Q99952 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN18Q99952 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPN18Q99952 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN18Q99952 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC20.25■□□□□ 0.83
PTPN18Q99952 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
PTPN18Q99952 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPN18Q99952 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN18Q99952 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN18Q99952 COPE-202ENST00000349893 948 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPN18Q99952 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.25■□□□□ 0.83
PTPN18Q99952 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN18Q99952 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPN18Q99952 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PTPN18Q99952 AJ011932.1-201ENST00000621707 465 ntBASIC20.25■□□□□ 0.83
PTPN18Q99952 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN18Q99952 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPN18Q99952 AC006116.8-202ENST00000587620 1550 ntBASIC20.25■□□□□ 0.83
PTPN18Q99952 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN18Q99952 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN18Q99952 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN18Q99952 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PTPN18Q99952 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms