Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF2Q99805 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.56■□□□□ 0.24
TM9SF2Q99805 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF2Q99805 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.56■□□□□ 0.24
TM9SF2Q99805 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.56■□□□□ 0.24
TM9SF2Q99805 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.56■□□□□ 0.24
TM9SF2Q99805 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF2Q99805 MTMR9LP-203ENST00000426597 1545 ntBASIC16.56■□□□□ 0.24
TM9SF2Q99805 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TM9SF2Q99805 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.56■□□□□ 0.24
TM9SF2Q99805 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF2Q99805 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
TM9SF2Q99805 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF2Q99805 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TM9SF2Q99805 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF2Q99805 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.56■□□□□ 0.24
TM9SF2Q99805 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF2Q99805 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TM9SF2Q99805 AL645929.1-201ENST00000420084 975 ntBASIC16.56■□□□□ 0.24
TM9SF2Q99805 AC092597.1-201ENST00000487352 616 ntBASIC16.56■□□□□ 0.24
TM9SF2Q99805 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.56■□□□□ 0.24
TM9SF2Q99805 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.56■□□□□ 0.24
TM9SF2Q99805 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.56■□□□□ 0.24
TM9SF2Q99805 AC009065.1-201ENST00000564055 1225 ntBASIC16.56■□□□□ 0.24
TM9SF2Q99805 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF2Q99805 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF2Q99805 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TM9SF2Q99805 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.56■□□□□ 0.24
TM9SF2Q99805 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF2Q99805 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TM9SF2Q99805 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.56■□□□□ 0.24
TM9SF2Q99805 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF2Q99805 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.56■□□□□ 0.24
TM9SF2Q99805 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TM9SF2Q99805 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF2Q99805 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
TM9SF2Q99805 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF2Q99805 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TM9SF2Q99805 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF2Q99805 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.56■□□□□ 0.24
TM9SF2Q99805 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF2Q99805 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TM9SF2Q99805 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TM9SF2Q99805 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF2Q99805 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF2Q99805 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TM9SF2Q99805 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TM9SF2Q99805 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF2Q99805 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
TM9SF2Q99805 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.55■□□□□ 0.24
TM9SF2Q99805 AC080080.1-201ENST00000625121 2420 ntBASIC16.55■□□□□ 0.24
TM9SF2Q99805 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF2Q99805 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TM9SF2Q99805 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF2Q99805 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF2Q99805 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF2Q99805 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.55■□□□□ 0.24
TM9SF2Q99805 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.55■□□□□ 0.24
TM9SF2Q99805 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
TM9SF2Q99805 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
TM9SF2Q99805 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.55■□□□□ 0.24
TM9SF2Q99805 AC010240.3-201ENST00000607688 395 ntBASIC16.55■□□□□ 0.24
TM9SF2Q99805 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.55■□□□□ 0.24
TM9SF2Q99805 AC093458.2-201ENST00000623150 629 ntBASIC16.55■□□□□ 0.24
TM9SF2Q99805 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.55■□□□□ 0.24
TM9SF2Q99805 AL157888.1-201ENST00000631930 593 ntBASIC16.55■□□□□ 0.24
TM9SF2Q99805 AC068587.9-201ENST00000641814 219 ntBASIC16.55■□□□□ 0.24
TM9SF2Q99805 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF2Q99805 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF2Q99805 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TM9SF2Q99805 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF2Q99805 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TM9SF2Q99805 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TM9SF2Q99805 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TM9SF2Q99805 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF2Q99805 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF2Q99805 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TM9SF2Q99805 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF2Q99805 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TM9SF2Q99805 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF2Q99805 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF2Q99805 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF2Q99805 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF2Q99805 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TM9SF2Q99805 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF2Q99805 AC012317.2-201ENST00000623305 2251 ntBASIC16.54■□□□□ 0.24
TM9SF2Q99805 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF2Q99805 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF2Q99805 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF2Q99805 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.54■□□□□ 0.24
TM9SF2Q99805 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF2Q99805 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF2Q99805 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF2Q99805 REXO1L9P-201ENST00000604264 2108 ntBASIC16.54■□□□□ 0.24
TM9SF2Q99805 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.54■□□□□ 0.24
TM9SF2Q99805 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.54■□□□□ 0.24
TM9SF2Q99805 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF2Q99805 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.54■□□□□ 0.24
TM9SF2Q99805 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.54■□□□□ 0.24
TM9SF2Q99805 AL391005.1-201ENST00000623953 2435 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms