Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB18PQ96TA0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PCDHB18PQ96TA0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB18PQ96TA0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PCDHB18PQ96TA0 AL645929.1-201ENST00000420084 975 ntBASIC18.88■□□□□ 0.61
PCDHB18PQ96TA0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
PCDHB18PQ96TA0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDHB18PQ96TA0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDHB18PQ96TA0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDHB18PQ96TA0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB18PQ96TA0 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.88■□□□□ 0.61
PCDHB18PQ96TA0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB18PQ96TA0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PCDHB18PQ96TA0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PCDHB18PQ96TA0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB18PQ96TA0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDHB18PQ96TA0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB18PQ96TA0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDHB18PQ96TA0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHB18PQ96TA0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB18PQ96TA0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB18PQ96TA0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PCDHB18PQ96TA0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB18PQ96TA0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHB18PQ96TA0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB18PQ96TA0 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB18PQ96TA0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHB18PQ96TA0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB18PQ96TA0 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB18PQ96TA0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB18PQ96TA0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB18PQ96TA0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB18PQ96TA0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB18PQ96TA0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB18PQ96TA0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB18PQ96TA0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB18PQ96TA0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB18PQ96TA0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB18PQ96TA0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB18PQ96TA0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB18PQ96TA0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB18PQ96TA0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHB18PQ96TA0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDHB18PQ96TA0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDHB18PQ96TA0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHB18PQ96TA0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB18PQ96TA0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
PCDHB18PQ96TA0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PCDHB18PQ96TA0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB18PQ96TA0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHB18PQ96TA0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB18PQ96TA0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHB18PQ96TA0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB18PQ96TA0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB18PQ96TA0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHB18PQ96TA0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB18PQ96TA0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB18PQ96TA0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHB18PQ96TA0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PCDHB18PQ96TA0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHB18PQ96TA0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB18PQ96TA0 AL031133.1-201ENST00000406807 723 ntBASIC18.86■□□□□ 0.61
PCDHB18PQ96TA0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB18PQ96TA0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB18PQ96TA0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHB18PQ96TA0 RN7SL606P-201ENST00000472779 293 ntBASIC18.86■□□□□ 0.61
PCDHB18PQ96TA0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB18PQ96TA0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PCDHB18PQ96TA0 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHB18PQ96TA0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PCDHB18PQ96TA0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB18PQ96TA0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHB18PQ96TA0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PCDHB18PQ96TA0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB18PQ96TA0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB18PQ96TA0 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB18PQ96TA0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHB18PQ96TA0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
PCDHB18PQ96TA0 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB18PQ96TA0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB18PQ96TA0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB18PQ96TA0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB18PQ96TA0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB18PQ96TA0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB18PQ96TA0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
PCDHB18PQ96TA0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHB18PQ96TA0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB18PQ96TA0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB18PQ96TA0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHB18PQ96TA0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHB18PQ96TA0 AC096633.1-201ENST00000422446 749 ntBASIC18.85■□□□□ 0.61
PCDHB18PQ96TA0 AL845331.1-201ENST00000424978 1190 ntBASIC18.85■□□□□ 0.61
PCDHB18PQ96TA0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.85■□□□□ 0.61
PCDHB18PQ96TA0 AL136038.3-201ENST00000561909 1096 ntBASIC18.85■□□□□ 0.61
PCDHB18PQ96TA0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHB18PQ96TA0 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB18PQ96TA0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHB18PQ96TA0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB18PQ96TA0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHB18PQ96TA0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms