Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 NSUN5P1-202ENST00000421140 1535 ntBASIC14.82□□□□□ -0.04
GAFA1Q96PS6 NSUN5P2-203ENST00000457352 1529 ntBASIC14.82□□□□□ -0.04
GAFA1Q96PS6 AC010460.3-201ENST00000511359 1579 ntBASIC14.81□□□□□ -0.04
GAFA1Q96PS6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 AC067852.2-201ENST00000590513 2313 ntBASIC14.81□□□□□ -0.04
GAFA1Q96PS6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 IGHV3-47-201ENST00000425060 335 ntBASIC14.81□□□□□ -0.04
GAFA1Q96PS6 AC007967.3-201ENST00000434308 558 ntBASIC14.81□□□□□ -0.04
GAFA1Q96PS6 MINOS1P3-201ENST00000457048 203 ntBASIC14.81□□□□□ -0.04
GAFA1Q96PS6 AC104819.1-201ENST00000504587 486 ntBASIC14.81□□□□□ -0.04
GAFA1Q96PS6 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 AC012615.1-201ENST00000565797 1299 ntBASIC14.81□□□□□ -0.04
GAFA1Q96PS6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 BX276092.7-203ENST00000637198 1536 ntBASIC14.81□□□□□ -0.04
GAFA1Q96PS6 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GAFA1Q96PS6 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 HTR7P1-202ENST00000624664 4411 ntBASIC14.8□□□□□ -0.04
GAFA1Q96PS6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GAFA1Q96PS6 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms