Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 FAM92A-204ENST00000517718 827 ntTSL 3 BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 MTMR9LP-203ENST00000426597 1545 ntBASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MS4A3Q96HJ5 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
MS4A3Q96HJ5 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.27■□□□□ 0.19
MS4A3Q96HJ5 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MS4A3Q96HJ5 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MS4A3Q96HJ5 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.27■□□□□ 0.19
MS4A3Q96HJ5 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
MS4A3Q96HJ5 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MS4A3Q96HJ5 AC080080.1-201ENST00000625121 2420 ntBASIC16.27■□□□□ 0.19
MS4A3Q96HJ5 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
MS4A3Q96HJ5 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MS4A3Q96HJ5 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.27■□□□□ 0.19
MS4A3Q96HJ5 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
MS4A3Q96HJ5 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 AL357033.4-201ENST00000617703 1807 ntBASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 AC009947.2-201ENST00000444014 672 ntBASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 OR4A48P-201ENST00000531359 391 ntBASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 AC068987.2-201ENST00000565518 896 ntBASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 RPL21P136-201ENST00000605378 396 ntBASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 AC091614.1-201ENST00000606898 879 ntTSL 3 BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 AL353770.4-202ENST00000621296 1126 ntTSL 3 BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 AL138966.2-201ENST00000621997 464 ntBASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 BX005040.1-201ENST00000622281 1126 ntTSL 5 BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 AC084018.2-201ENST00000613093 2607 ntBASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MS4A3Q96HJ5 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MS4A3Q96HJ5 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
MS4A3Q96HJ5 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.25■□□□□ 0.19
MS4A3Q96HJ5 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.25■□□□□ 0.19
MS4A3Q96HJ5 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MS4A3Q96HJ5 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MS4A3Q96HJ5 AC106872.6-201ENST00000514228 1346 ntBASIC16.25■□□□□ 0.19
MS4A3Q96HJ5 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.25■□□□□ 0.19
MS4A3Q96HJ5 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.25■□□□□ 0.19
MS4A3Q96HJ5 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MS4A3Q96HJ5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MS4A3Q96HJ5 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.25■□□□□ 0.19
MS4A3Q96HJ5 UBE2D3-202ENST00000338145 896 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
MS4A3Q96HJ5 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MS4A3Q96HJ5 CFTRP3-201ENST00000376400 212 ntBASIC16.25■□□□□ 0.19
MS4A3Q96HJ5 MRPL47-202ENST00000392659 673 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MS4A3Q96HJ5 TRIM60P13-201ENST00000432350 1283 ntBASIC16.25■□□□□ 0.19
MS4A3Q96HJ5 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MS4A3Q96HJ5 AC010460.2-201ENST00000509054 677 ntBASIC16.25■□□□□ 0.19
MS4A3Q96HJ5 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC16.25■□□□□ 0.19
MS4A3Q96HJ5 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.25■□□□□ 0.19
MS4A3Q96HJ5 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.25■□□□□ 0.19
MS4A3Q96HJ5 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC16.25■□□□□ 0.19
MS4A3Q96HJ5 VBP1-203ENST00000535916 944 ntTSL 2 BASIC16.25■□□□□ 0.19
MS4A3Q96HJ5 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.25■□□□□ 0.19
MS4A3Q96HJ5 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC16.25■□□□□ 0.19
MS4A3Q96HJ5 E2F3P1-201ENST00000589887 1230 ntBASIC16.25■□□□□ 0.19
MS4A3Q96HJ5 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.25■□□□□ 0.19
MS4A3Q96HJ5 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms