Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SH3KBP1Q96B97 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 AC074051.2-201ENST00000565115 352 ntBASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SH3KBP1Q96B97 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 TSPY12P-201ENST00000421279 868 ntBASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 AL024508.2-201ENST00000607749 1894 ntBASIC17.65■□□□□ 0.42
SH3KBP1Q96B97 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SH3KBP1Q96B97 AC135776.1-201ENST00000319817 2481 ntBASIC17.64■□□□□ 0.42
SH3KBP1Q96B97 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SH3KBP1Q96B97 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.64■□□□□ 0.41
SH3KBP1Q96B97 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms