Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 SLC25A6P2-201ENST00000497974 877 ntBASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 AC243562.1-201ENST00000560672 389 ntBASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 AC145423.3-201ENST00000615987 467 ntBASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 AC092720.2-201ENST00000602388 1665 ntBASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 CD81-207ENST00000481687 890 ntTSL 2 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 SPDYE12P-201ENST00000618416 771 ntBASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 AC009154.2-201ENST00000621177 724 ntBASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 RN7SL596P-201ENST00000582123 288 ntBASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 AC007431.3-201ENST00000623221 587 ntBASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 CSF2RBP1-201ENST00000447905 391 ntBASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 AP001527.2-201ENST00000614441 631 ntBASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 AL024507.2-201ENST00000606070 2574 ntBASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 AC233280.19-201ENST00000633223 136 ntBASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE2Q8WXH0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
SYNE2Q8WXH0 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SYNE2Q8WXH0 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SYNE2Q8WXH0 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SYNE2Q8WXH0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SYNE2Q8WXH0 AC087499.6-201ENST00000411576 835 ntBASIC7.11□□□□□ -1.27
SYNE2Q8WXH0 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC7.11□□□□□ -1.27
SYNE2Q8WXH0 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms