Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 AC133681.1-201ENST00000465482 601 ntBASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 MIR4674-201ENST00000582457 87 ntBASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 AC124016.1-201ENST00000609552 612 ntBASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 AC110285.5-201ENST00000611501 352 ntBASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 PCDHA1-201ENST00000378133 2726 ntBASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CKAP2Q8WWK9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CKAP2Q8WWK9 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.71■□□□□ 0.42
CKAP2Q8WWK9 LINC02199-201ENST00000506655 2702 ntBASIC17.71■□□□□ 0.42
CKAP2Q8WWK9 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CKAP2Q8WWK9 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.7■□□□□ 0.42
CKAP2Q8WWK9 AC009949.1-201ENST00000623048 1830 ntBASIC17.7■□□□□ 0.42
CKAP2Q8WWK9 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CKAP2Q8WWK9 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.7■□□□□ 0.42
CKAP2Q8WWK9 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.7■□□□□ 0.42
CKAP2Q8WWK9 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CKAP2Q8WWK9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CKAP2Q8WWK9 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CKAP2Q8WWK9 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CKAP2Q8WWK9 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CKAP2Q8WWK9 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CKAP2Q8WWK9 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
CKAP2Q8WWK9 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CKAP2Q8WWK9 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CKAP2Q8WWK9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CKAP2Q8WWK9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.7■□□□□ 0.42
CKAP2Q8WWK9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CKAP2Q8WWK9 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CKAP2Q8WWK9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CKAP2Q8WWK9 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CKAP2Q8WWK9 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CKAP2Q8WWK9 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CKAP2Q8WWK9 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CKAP2Q8WWK9 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CKAP2Q8WWK9 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CKAP2Q8WWK9 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.7■□□□□ 0.42
CKAP2Q8WWK9 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.7■□□□□ 0.42
CKAP2Q8WWK9 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 AC096733.2-201ENST00000609937 1394 ntBASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 AP003097.1-201ENST00000530657 1135 ntBASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 AC116407.2-201ENST00000613639 860 ntBASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 AC026691.1-201ENST00000602502 2017 ntBASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 PKD1P1-201ENST00000458669 6805 ntBASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CKAP2Q8WWK9 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CKAP2Q8WWK9 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms