Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 KRT18P65-201ENST00000439811 1286 ntBASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 AC128688.1-201ENST00000487626 519 ntBASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC44A1Q8WWI5 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC44A1Q8WWI5 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC44A1Q8WWI5 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.85■□□□□ 0.45
SLC44A1Q8WWI5 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SLC44A1Q8WWI5 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
SLC44A1Q8WWI5 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC44A1Q8WWI5 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SLC44A1Q8WWI5 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLC44A1Q8WWI5 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC44A1Q8WWI5 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.85■□□□□ 0.45
SLC44A1Q8WWI5 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLC44A1Q8WWI5 MIR718-201ENST00000390190 70 ntBASIC17.85■□□□□ 0.45
SLC44A1Q8WWI5 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC44A1Q8WWI5 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.85■□□□□ 0.45
SLC44A1Q8WWI5 CYP2D8P-201ENST00000433633 1490 ntBASIC17.85■□□□□ 0.45
SLC44A1Q8WWI5 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.85■□□□□ 0.45
SLC44A1Q8WWI5 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.85■□□□□ 0.45
SLC44A1Q8WWI5 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
SLC44A1Q8WWI5 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.85■□□□□ 0.45
SLC44A1Q8WWI5 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SLC44A1Q8WWI5 AL355075.4-201ENST00000554988 638 ntBASIC17.85■□□□□ 0.45
SLC44A1Q8WWI5 AL512604.3-201ENST00000569583 964 ntBASIC17.85■□□□□ 0.45
SLC44A1Q8WWI5 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC44A1Q8WWI5 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SLC44A1Q8WWI5 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLC44A1Q8WWI5 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC44A1Q8WWI5 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC44A1Q8WWI5 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.84■□□□□ 0.45
SLC44A1Q8WWI5 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
SLC44A1Q8WWI5 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
SLC44A1Q8WWI5 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
SLC44A1Q8WWI5 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLC44A1Q8WWI5 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
SLC44A1Q8WWI5 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SLC44A1Q8WWI5 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms