Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 DUTP2-201ENST00000519164 463 ntBASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.31■□□□□ 0.2
CNIH3Q8TBE1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 AL391005.1-201ENST00000623953 2435 ntBASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 AC090192.1-201ENST00000517740 490 ntBASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CNIH3Q8TBE1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 AC079328.2-201ENST00000561241 3354 ntBASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 AC130371.2-201ENST00000619443 611 ntBASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNIH3Q8TBE1 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms