Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 AC116407.3-201ENST00000623905 1129 ntBASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 BICD1-207ENST00000551848 1962 ntBASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 RPL13AP23-201ENST00000480739 586 ntBASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 KRT18P58-201ENST00000527480 1120 ntBASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHKBP1Q8TBC3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHKBP1Q8TBC3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.67■□□□□ 0.58
SHKBP1Q8TBC3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHKBP1Q8TBC3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.67■□□□□ 0.58
SHKBP1Q8TBC3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SHKBP1Q8TBC3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.67■□□□□ 0.58
SHKBP1Q8TBC3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SHKBP1Q8TBC3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SHKBP1Q8TBC3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SHKBP1Q8TBC3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SHKBP1Q8TBC3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SHKBP1Q8TBC3 AL356309.3-201ENST00000624132 1934 ntBASIC18.67■□□□□ 0.58
SHKBP1Q8TBC3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHKBP1Q8TBC3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHKBP1Q8TBC3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.67■□□□□ 0.58
SHKBP1Q8TBC3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHKBP1Q8TBC3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.67■□□□□ 0.58
SHKBP1Q8TBC3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.67■□□□□ 0.58
SHKBP1Q8TBC3 RPS2P1-201ENST00000434010 821 ntBASIC18.67■□□□□ 0.58
SHKBP1Q8TBC3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHKBP1Q8TBC3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.67■□□□□ 0.58
SHKBP1Q8TBC3 AC117500.6-201ENST00000624871 588 ntBASIC18.67■□□□□ 0.58
SHKBP1Q8TBC3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHKBP1Q8TBC3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
SHKBP1Q8TBC3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms