Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 AC003669.1-201ENST00000334569 611 ntBASIC13.8□□□□□ -0.2
LINC01006Q8NI28 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 KLF4P1-201ENST00000412782 1185 ntBASIC13.8□□□□□ -0.2
LINC01006Q8NI28 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 MIR4751-201ENST00000578027 74 ntBASIC13.8□□□□□ -0.2
LINC01006Q8NI28 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 AC002310.6-201ENST00000624451 1377 ntBASIC13.8□□□□□ -0.2
LINC01006Q8NI28 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 CROCCP3-202ENST00000420820 1947 ntBASIC13.8□□□□□ -0.2
LINC01006Q8NI28 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 AL096828.2-201ENST00000567259 1965 ntBASIC13.8□□□□□ -0.2
LINC01006Q8NI28 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 FUT8-AS1-201ENST00000621019 1521 ntBASIC13.8□□□□□ -0.2
LINC01006Q8NI28 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC01006Q8NI28 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC01006Q8NI28 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01006Q8NI28 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LINC01006Q8NI28 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01006Q8NI28 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01006Q8NI28 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
LINC01006Q8NI28 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LINC01006Q8NI28 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01006Q8NI28 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LINC01006Q8NI28 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01006Q8NI28 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LINC01006Q8NI28 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.79□□□□□ -0.2
LINC01006Q8NI28 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.79□□□□□ -0.2
LINC01006Q8NI28 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC01006Q8NI28 AC108073.2-201ENST00000464002 357 ntBASIC13.79□□□□□ -0.2
LINC01006Q8NI28 S100A2-206ENST00000497140 697 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC01006Q8NI28 AC005829.1-201ENST00000570002 483 ntBASIC13.79□□□□□ -0.2
LINC01006Q8NI28 AC027796.2-201ENST00000575326 344 ntBASIC13.79□□□□□ -0.2
LINC01006Q8NI28 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01006Q8NI28 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01006Q8NI28 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
LINC01006Q8NI28 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC01006Q8NI28 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01006Q8NI28 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01006Q8NI28 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.79□□□□□ -0.2
LINC01006Q8NI28 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01006Q8NI28 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01006Q8NI28 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LINC01006Q8NI28 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01006Q8NI28 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 VN2R19P-201ENST00000442399 1052 ntBASIC13.78□□□□□ -0.2
LINC01006Q8NI28 AP006288.1-201ENST00000446065 395 ntBASIC13.78□□□□□ -0.2
LINC01006Q8NI28 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 RPS15P9-201ENST00000494093 319 ntBASIC13.78□□□□□ -0.2
LINC01006Q8NI28 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 IGHV3-65-201ENST00000523210 341 ntBASIC13.78□□□□□ -0.2
LINC01006Q8NI28 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 TMED1-207ENST00000591695 809 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 AL355385.1-201ENST00000606123 409 ntBASIC13.78□□□□□ -0.2
LINC01006Q8NI28 AC008667.4-201ENST00000607370 168 ntBASIC13.78□□□□□ -0.2
LINC01006Q8NI28 AC116407.2-201ENST00000613639 860 ntBASIC13.78□□□□□ -0.2
LINC01006Q8NI28 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms