Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 DUTP2-201ENST00000519164 463 ntBASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 AC007950.2-201ENST00000615045 2347 ntBASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCDC197Q8NCU1 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CCDC197Q8NCU1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC197Q8NCU1 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC197Q8NCU1 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC197Q8NCU1 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC197Q8NCU1 AL163051.1-201ENST00000569214 1512 ntBASIC17.69■□□□□ 0.42
CCDC197Q8NCU1 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC197Q8NCU1 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC197Q8NCU1 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC197Q8NCU1 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CCDC197Q8NCU1 AC022188.1-201ENST00000620960 1664 ntBASIC17.69■□□□□ 0.42
CCDC197Q8NCU1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC197Q8NCU1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC197Q8NCU1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC197Q8NCU1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CCDC197Q8NCU1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CCDC197Q8NCU1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.69■□□□□ 0.42
CCDC197Q8NCU1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC197Q8NCU1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC197Q8NCU1 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC197Q8NCU1 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC197Q8NCU1 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC197Q8NCU1 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC197Q8NCU1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC197Q8NCU1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCDC197Q8NCU1 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC197Q8NCU1 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 DUSP5P2-201ENST00000426873 1033 ntBASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 LINC01451-201ENST00000623792 534 ntBASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 TSPY26P-202ENST00000565928 3884 ntBASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms