Protein–RNA interactions for Protein: Q8N4S0

CCDC82, Coiled-coil domain-containing protein 82, humanhuman

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC82Q8N4S0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC82Q8N4S0 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC82Q8N4S0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC82Q8N4S0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC82Q8N4S0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 AC233702.3-201ENST00000578656 1387 ntBASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 DRAXINP1-201ENST00000437611 948 ntBASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 HCG4P8-203ENST00000443049 980 ntBASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 AC134043.2-201ENST00000624206 2238 ntBASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 KRT18P55-202ENST00000578578 1546 ntBASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC82Q8N4S0 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC82Q8N4S0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
CCDC82Q8N4S0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC82Q8N4S0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC82Q8N4S0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC82Q8N4S0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC82Q8N4S0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC82Q8N4S0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC82Q8N4S0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC82Q8N4S0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.77■□□□□ 0.92
CCDC82Q8N4S0 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.77■□□□□ 0.92
CCDC82Q8N4S0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.77■□□□□ 0.92
CCDC82Q8N4S0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC82Q8N4S0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.77■□□□□ 0.92
CCDC82Q8N4S0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CCDC82Q8N4S0 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC82Q8N4S0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC82Q8N4S0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC82Q8N4S0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC82Q8N4S0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC82Q8N4S0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC82Q8N4S0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.91
CCDC82Q8N4S0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 AC005336.2-201ENST00000593183 939 ntBASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 NOC2LP2-201ENST00000407594 1944 ntBASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCDC82Q8N4S0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC82Q8N4S0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC82Q8N4S0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC82Q8N4S0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC82Q8N4S0 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC82Q8N4S0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC82Q8N4S0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC82Q8N4S0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms