Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SIX5Q8N196 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.21■□□□□ 0.51
SIX5Q8N196 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SIX5Q8N196 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.21■□□□□ 0.51
SIX5Q8N196 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SIX5Q8N196 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SIX5Q8N196 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SIX5Q8N196 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.5
SIX5Q8N196 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.21■□□□□ 0.5
SIX5Q8N196 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SIX5Q8N196 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX5Q8N196 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX5Q8N196 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX5Q8N196 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX5Q8N196 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX5Q8N196 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SIX5Q8N196 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SIX5Q8N196 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX5Q8N196 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SIX5Q8N196 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX5Q8N196 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX5Q8N196 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SIX5Q8N196 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.2■□□□□ 0.5
SIX5Q8N196 MKNK2P1-201ENST00000437526 628 ntBASIC18.2■□□□□ 0.5
SIX5Q8N196 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.2■□□□□ 0.5
SIX5Q8N196 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.2■□□□□ 0.5
SIX5Q8N196 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SIX5Q8N196 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SIX5Q8N196 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.2■□□□□ 0.5
SIX5Q8N196 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.2■□□□□ 0.5
SIX5Q8N196 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX5Q8N196 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX5Q8N196 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SIX5Q8N196 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX5Q8N196 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX5Q8N196 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.2■□□□□ 0.5
SIX5Q8N196 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX5Q8N196 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SIX5Q8N196 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX5Q8N196 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX5Q8N196 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SIX5Q8N196 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX5Q8N196 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX5Q8N196 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SIX5Q8N196 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIX5Q8N196 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIX5Q8N196 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.19■□□□□ 0.5
SIX5Q8N196 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SIX5Q8N196 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.19■□□□□ 0.5
SIX5Q8N196 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIX5Q8N196 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.19■□□□□ 0.5
SIX5Q8N196 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIX5Q8N196 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SIX5Q8N196 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIX5Q8N196 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIX5Q8N196 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SIX5Q8N196 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIX5Q8N196 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.19■□□□□ 0.5
SIX5Q8N196 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.19■□□□□ 0.5
SIX5Q8N196 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.19■□□□□ 0.5
SIX5Q8N196 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.19■□□□□ 0.5
SIX5Q8N196 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.19■□□□□ 0.5
SIX5Q8N196 PRYP5-201ENST00000451909 266 ntBASIC18.19■□□□□ 0.5
SIX5Q8N196 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIX5Q8N196 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.19■□□□□ 0.5
SIX5Q8N196 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SIX5Q8N196 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.19■□□□□ 0.5
SIX5Q8N196 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.19■□□□□ 0.5
SIX5Q8N196 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SIX5Q8N196 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.19■□□□□ 0.5
SIX5Q8N196 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIX5Q8N196 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIX5Q8N196 GPR89P-201ENST00000407924 1495 ntBASIC18.19■□□□□ 0.5
SIX5Q8N196 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SIX5Q8N196 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.19■□□□□ 0.5
SIX5Q8N196 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIX5Q8N196 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX5Q8N196 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX5Q8N196 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIX5Q8N196 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIX5Q8N196 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX5Q8N196 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.18■□□□□ 0.5
SIX5Q8N196 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.18■□□□□ 0.5
SIX5Q8N196 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIX5Q8N196 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.18■□□□□ 0.5
SIX5Q8N196 VN2R19P-201ENST00000442399 1052 ntBASIC18.18■□□□□ 0.5
SIX5Q8N196 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.18■□□□□ 0.5
SIX5Q8N196 COX20P2-201ENST00000452636 358 ntBASIC18.18■□□□□ 0.5
SIX5Q8N196 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
SIX5Q8N196 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.18■□□□□ 0.5
SIX5Q8N196 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.18■□□□□ 0.5
SIX5Q8N196 SPCS2P1-201ENST00000561636 679 ntBASIC18.18■□□□□ 0.5
SIX5Q8N196 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.18■□□□□ 0.5
SIX5Q8N196 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SIX5Q8N196 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.18■□□□□ 0.5
SIX5Q8N196 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
SIX5Q8N196 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.18■□□□□ 0.5
SIX5Q8N196 AC093028.1-201ENST00000622998 982 ntBASIC18.18■□□□□ 0.5
SIX5Q8N196 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIX5Q8N196 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms