Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 AC022145.2-201ENST00000598203 171 ntBASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 AC004461.1-201ENST00000412461 403 ntBASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 AC109322.1-201ENST00000524499 1264 ntBASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 SNHG9-202ENST00000564014 471 ntBASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 MIR3197-201ENST00000582241 73 ntBASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 AC099522.2-201ENST00000607001 744 ntBASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 AC093512.1-201ENST00000617969 520 ntBASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 AC097637.2-201ENST00000624096 1997 ntBASIC16.62■□□□□ 0.25
COL27A1Q8IZC6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL27A1Q8IZC6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL27A1Q8IZC6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL27A1Q8IZC6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.62■□□□□ 0.25
COL27A1Q8IZC6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL27A1Q8IZC6 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.62■□□□□ 0.25
COL27A1Q8IZC6 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL27A1Q8IZC6 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.62■□□□□ 0.25
COL27A1Q8IZC6 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL27A1Q8IZC6 PTCHD3P3-201ENST00000403073 906 ntBASIC16.62■□□□□ 0.25
COL27A1Q8IZC6 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.62■□□□□ 0.25
COL27A1Q8IZC6 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.62■□□□□ 0.25
COL27A1Q8IZC6 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.62■□□□□ 0.25
COL27A1Q8IZC6 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.62■□□□□ 0.25
COL27A1Q8IZC6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.62■□□□□ 0.25
COL27A1Q8IZC6 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
COL27A1Q8IZC6 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.62■□□□□ 0.25
COL27A1Q8IZC6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL27A1Q8IZC6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL27A1Q8IZC6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL27A1Q8IZC6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
COL27A1Q8IZC6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL27A1Q8IZC6 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.62■□□□□ 0.25
COL27A1Q8IZC6 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.62■□□□□ 0.25
COL27A1Q8IZC6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 AC092919.2-201ENST00000623631 1645 ntBASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 BCAR1-209ENST00000546196 1340 ntBASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 AC096734.2-201ENST00000562054 433 ntBASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 AC023141.5-201ENST00000458585 616 ntBASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 AC005498.2-205ENST00000593218 784 ntBASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 AL513210.1-201ENST00000629608 234 ntBASIC16.61■□□□□ 0.25
COL27A1Q8IZC6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL27A1Q8IZC6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.6■□□□□ 0.25
COL27A1Q8IZC6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
COL27A1Q8IZC6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
COL27A1Q8IZC6 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
COL27A1Q8IZC6 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.6■□□□□ 0.25
COL27A1Q8IZC6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL27A1Q8IZC6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COL27A1Q8IZC6 REXO1L11P-201ENST00000620964 1927 ntBASIC16.6■□□□□ 0.25
COL27A1Q8IZC6 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
COL27A1Q8IZC6 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.6■□□□□ 0.25
COL27A1Q8IZC6 LINC00982-205ENST00000420957 435 ntBASIC16.6■□□□□ 0.25
COL27A1Q8IZC6 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COL27A1Q8IZC6 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL27A1Q8IZC6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.6■□□□□ 0.25
COL27A1Q8IZC6 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms