Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 AL139384.1-201ENST00000612143 3047 ntBASIC17.66■□□□□ 0.42
CPNE9Q8IYJ1 AL671277.2-201ENST00000458060 996 ntBASIC17.66■□□□□ 0.42
CPNE9Q8IYJ1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.66■□□□□ 0.42
CPNE9Q8IYJ1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.66■□□□□ 0.42
CPNE9Q8IYJ1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.66■□□□□ 0.42
CPNE9Q8IYJ1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.66■□□□□ 0.42
CPNE9Q8IYJ1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CPNE9Q8IYJ1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE9Q8IYJ1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CPNE9Q8IYJ1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE9Q8IYJ1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
CPNE9Q8IYJ1 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
CPNE9Q8IYJ1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CPNE9Q8IYJ1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE9Q8IYJ1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE9Q8IYJ1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE9Q8IYJ1 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CPNE9Q8IYJ1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE9Q8IYJ1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CPNE9Q8IYJ1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
CPNE9Q8IYJ1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CPNE9Q8IYJ1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE9Q8IYJ1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE9Q8IYJ1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.65■□□□□ 0.42
CPNE9Q8IYJ1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE9Q8IYJ1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE9Q8IYJ1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE9Q8IYJ1 TSPY12P-201ENST00000421279 868 ntBASIC17.65■□□□□ 0.42
CPNE9Q8IYJ1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.65■□□□□ 0.42
CPNE9Q8IYJ1 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE9Q8IYJ1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.65■□□□□ 0.42
CPNE9Q8IYJ1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.65■□□□□ 0.42
CPNE9Q8IYJ1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.65■□□□□ 0.42
CPNE9Q8IYJ1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.65■□□□□ 0.42
CPNE9Q8IYJ1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.65■□□□□ 0.42
CPNE9Q8IYJ1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE9Q8IYJ1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.65■□□□□ 0.42
CPNE9Q8IYJ1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE9Q8IYJ1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.65■□□□□ 0.42
CPNE9Q8IYJ1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE9Q8IYJ1 AL353692.3-201ENST00000407031 1396 ntBASIC17.65■□□□□ 0.42
CPNE9Q8IYJ1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CPNE9Q8IYJ1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.64■□□□□ 0.42
CPNE9Q8IYJ1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.64■□□□□ 0.41
CPNE9Q8IYJ1 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE9Q8IYJ1 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE9Q8IYJ1 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE9Q8IYJ1 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE9Q8IYJ1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE9Q8IYJ1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE9Q8IYJ1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE9Q8IYJ1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE9Q8IYJ1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.64■□□□□ 0.41
CPNE9Q8IYJ1 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.64■□□□□ 0.41
CPNE9Q8IYJ1 GPR32P1-201ENST00000601788 811 ntBASIC17.64■□□□□ 0.41
CPNE9Q8IYJ1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.64■□□□□ 0.41
CPNE9Q8IYJ1 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE9Q8IYJ1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE9Q8IYJ1 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
CPNE9Q8IYJ1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE9Q8IYJ1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE9Q8IYJ1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE9Q8IYJ1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE9Q8IYJ1 KRT8P47-201ENST00000604727 1398 ntBASIC17.64■□□□□ 0.41
CPNE9Q8IYJ1 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE9Q8IYJ1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE9Q8IYJ1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE9Q8IYJ1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 LINC01238-205ENST00000567549 1107 ntBASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 RNF126P1-202ENST00000569893 925 ntBASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 AC005332.3-201ENST00000589904 676 ntBASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 AC009154.2-201ENST00000621177 724 ntBASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE9Q8IYJ1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms