Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC25.11■■□□□ 1.61
UBR1Q8IWV7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC25.11■■□□□ 1.61
UBR1Q8IWV7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
UBR1Q8IWV7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC25.11■■□□□ 1.61
UBR1Q8IWV7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
UBR1Q8IWV7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
UBR1Q8IWV7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
UBR1Q8IWV7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
UBR1Q8IWV7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
UBR1Q8IWV7 AL513480.1-201ENST00000451731 511 ntBASIC25.11■■□□□ 1.61
UBR1Q8IWV7 UGT1A2P-201ENST00000454886 866 ntBASIC25.11■■□□□ 1.61
UBR1Q8IWV7 AC087163.2-201ENST00000457299 853 ntBASIC25.11■■□□□ 1.61
UBR1Q8IWV7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC25.11■■□□□ 1.61
UBR1Q8IWV7 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC25.11■■□□□ 1.61
UBR1Q8IWV7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
UBR1Q8IWV7 AP001059.3-201ENST00000619053 235 ntBASIC25.11■■□□□ 1.61
UBR1Q8IWV7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
UBR1Q8IWV7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
UBR1Q8IWV7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC25.1■■□□□ 1.61
UBR1Q8IWV7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
UBR1Q8IWV7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
UBR1Q8IWV7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
UBR1Q8IWV7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
UBR1Q8IWV7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC25.1■■□□□ 1.61
UBR1Q8IWV7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
UBR1Q8IWV7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC25.1■■□□□ 1.61
UBR1Q8IWV7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
UBR1Q8IWV7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
UBR1Q8IWV7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
UBR1Q8IWV7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
UBR1Q8IWV7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC25.1■■□□□ 1.61
UBR1Q8IWV7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
UBR1Q8IWV7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC25.1■■□□□ 1.61
UBR1Q8IWV7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
UBR1Q8IWV7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
UBR1Q8IWV7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC25.09■■□□□ 1.61
UBR1Q8IWV7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC25.09■■□□□ 1.61
UBR1Q8IWV7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC25.09■■□□□ 1.61
UBR1Q8IWV7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC25.09■■□□□ 1.61
UBR1Q8IWV7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
UBR1Q8IWV7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC25.09■■□□□ 1.61
UBR1Q8IWV7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
UBR1Q8IWV7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC25.09■■□□□ 1.61
UBR1Q8IWV7 BX276092.7-203ENST00000637198 1536 ntBASIC25.09■■□□□ 1.61
UBR1Q8IWV7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
UBR1Q8IWV7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
UBR1Q8IWV7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
UBR1Q8IWV7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
UBR1Q8IWV7 DDX43P3-201ENST00000441064 443 ntBASIC25.09■■□□□ 1.61
UBR1Q8IWV7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
UBR1Q8IWV7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC25.09■■□□□ 1.61
UBR1Q8IWV7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC25.09■■□□□ 1.61
UBR1Q8IWV7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC25.09■■□□□ 1.61
UBR1Q8IWV7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC25.09■■□□□ 1.61
UBR1Q8IWV7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC25.09■■□□□ 1.61
UBR1Q8IWV7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
UBR1Q8IWV7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC25.09■■□□□ 1.61
UBR1Q8IWV7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC25.08■■□□□ 1.61
UBR1Q8IWV7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
UBR1Q8IWV7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
UBR1Q8IWV7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
UBR1Q8IWV7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC25.08■■□□□ 1.61
UBR1Q8IWV7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC25.08■■□□□ 1.61
UBR1Q8IWV7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
UBR1Q8IWV7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
UBR1Q8IWV7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC25.08■■□□□ 1.61
UBR1Q8IWV7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
UBR1Q8IWV7 SPDYE11-202ENST00000450699 704 ntBASIC25.08■■□□□ 1.61
UBR1Q8IWV7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC25.08■■□□□ 1.61
UBR1Q8IWV7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC25.08■■□□□ 1.61
UBR1Q8IWV7 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC25.08■■□□□ 1.61
UBR1Q8IWV7 SPDYE9P-201ENST00000570642 692 ntBASIC25.08■■□□□ 1.61
UBR1Q8IWV7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC25.08■■□□□ 1.61
UBR1Q8IWV7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
UBR1Q8IWV7 SPDYE10P-202ENST00000612005 668 ntBASIC25.08■■□□□ 1.61
UBR1Q8IWV7 SPDYE8P-202ENST00000612377 668 ntBASIC25.08■■□□□ 1.61
UBR1Q8IWV7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
UBR1Q8IWV7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC25.08■■□□□ 1.61
UBR1Q8IWV7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC25.08■■□□□ 1.61
UBR1Q8IWV7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
UBR1Q8IWV7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
UBR1Q8IWV7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
UBR1Q8IWV7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
UBR1Q8IWV7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
UBR1Q8IWV7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC25.07■■□□□ 1.6
UBR1Q8IWV7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC25.07■■□□□ 1.6
UBR1Q8IWV7 RN7SL204P-201ENST00000582831 262 ntBASIC25.07■■□□□ 1.6
UBR1Q8IWV7 AC026120.1-201ENST00000611536 926 ntBASIC25.07■■□□□ 1.6
UBR1Q8IWV7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC25.07■■□□□ 1.6
UBR1Q8IWV7 AC126763.1-201ENST00000552015 2118 ntBASIC25.07■■□□□ 1.6
UBR1Q8IWV7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC25.07■■□□□ 1.6
UBR1Q8IWV7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
UBR1Q8IWV7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
UBR1Q8IWV7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC25.07■■□□□ 1.6
UBR1Q8IWV7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
UBR1Q8IWV7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
UBR1Q8IWV7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC25.07■■□□□ 1.6
UBR1Q8IWV7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC25.06■■□□□ 1.6
UBR1Q8IWV7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
UBR1Q8IWV7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms