Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SCN4BQ8IWT1 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.77■□□□□ 0.6
SCN4BQ8IWT1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCN4BQ8IWT1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCN4BQ8IWT1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCN4BQ8IWT1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCN4BQ8IWT1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.77■□□□□ 0.6
SCN4BQ8IWT1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCN4BQ8IWT1 MRPL3P1-201ENST00000400109 1033 ntBASIC18.77■□□□□ 0.6
SCN4BQ8IWT1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SCN4BQ8IWT1 FAM197Y8-203ENST00000450145 560 ntBASIC18.77■□□□□ 0.6
SCN4BQ8IWT1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCN4BQ8IWT1 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
SCN4BQ8IWT1 AC079776.4-201ENST00000511039 504 ntBASIC18.77■□□□□ 0.6
SCN4BQ8IWT1 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.77■□□□□ 0.6
SCN4BQ8IWT1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.77■□□□□ 0.6
SCN4BQ8IWT1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.77■□□□□ 0.6
SCN4BQ8IWT1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.77■□□□□ 0.6
SCN4BQ8IWT1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SCN4BQ8IWT1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCN4BQ8IWT1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.77■□□□□ 0.6
SCN4BQ8IWT1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
SCN4BQ8IWT1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.77■□□□□ 0.59
SCN4BQ8IWT1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.77■□□□□ 0.59
SCN4BQ8IWT1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SCN4BQ8IWT1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
SCN4BQ8IWT1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 AC096633.1-201ENST00000422446 749 ntBASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 ABCD1P5-201ENST00000445663 754 ntBASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN4BQ8IWT1 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 SLC25A6P4-201ENST00000586535 553 ntBASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 AL355877.3-201ENST00000622820 899 ntBASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN4BQ8IWT1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCN4BQ8IWT1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms