Protein–RNA interactions for Protein: Q8IWA5

SLC44A2, Choline transporter-like protein 2, humanhuman

Predicted RBP Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2Q8IWA5 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.98■□□□□ 0.31
SLC44A2Q8IWA5 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 SIRPAP1-201ENST00000448467 1770 ntBASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC44A2Q8IWA5 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SLC44A2Q8IWA5 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC44A2Q8IWA5 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.96■□□□□ 0.31
SLC44A2Q8IWA5 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms