Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.22■□□□□ 0.67
HERC6Q8IVU3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.22■□□□□ 0.67
HERC6Q8IVU3 AC122714.2-201ENST00000502787 707 ntBASIC19.22■□□□□ 0.67
HERC6Q8IVU3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.22■□□□□ 0.67
HERC6Q8IVU3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.22■□□□□ 0.67
HERC6Q8IVU3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.22■□□□□ 0.67
HERC6Q8IVU3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
HERC6Q8IVU3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.22■□□□□ 0.67
HERC6Q8IVU3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HERC6Q8IVU3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HERC6Q8IVU3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.22■□□□□ 0.67
HERC6Q8IVU3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
HERC6Q8IVU3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HERC6Q8IVU3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
HERC6Q8IVU3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HERC6Q8IVU3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 MKNK2P1-201ENST00000437526 628 ntBASIC19.21■□□□□ 0.67
HERC6Q8IVU3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 AC018845.2-201ENST00000568326 409 ntBASIC19.21■□□□□ 0.67
HERC6Q8IVU3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HERC6Q8IVU3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERC6Q8IVU3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.2■□□□□ 0.66
HERC6Q8IVU3 AL499627.1-201ENST00000569373 2188 ntBASIC19.2■□□□□ 0.66
HERC6Q8IVU3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERC6Q8IVU3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERC6Q8IVU3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HERC6Q8IVU3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HERC6Q8IVU3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERC6Q8IVU3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HERC6Q8IVU3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HERC6Q8IVU3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERC6Q8IVU3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
HERC6Q8IVU3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HERC6Q8IVU3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERC6Q8IVU3 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.2■□□□□ 0.66
HERC6Q8IVU3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERC6Q8IVU3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.2■□□□□ 0.66
HERC6Q8IVU3 VN2R19P-201ENST00000442399 1052 ntBASIC19.2■□□□□ 0.66
HERC6Q8IVU3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.2■□□□□ 0.66
HERC6Q8IVU3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.2■□□□□ 0.66
HERC6Q8IVU3 AL078644.1-201ENST00000609881 752 ntBASIC19.2■□□□□ 0.66
HERC6Q8IVU3 AC106028.4-201ENST00000614509 607 ntBASIC19.2■□□□□ 0.66
HERC6Q8IVU3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.2■□□□□ 0.66
HERC6Q8IVU3 AL513190.1-201ENST00000621254 727 ntBASIC19.2■□□□□ 0.66
HERC6Q8IVU3 AC004706.3-202ENST00000621574 984 ntBASIC19.2■□□□□ 0.66
HERC6Q8IVU3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERC6Q8IVU3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HERC6Q8IVU3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.2■□□□□ 0.66
HERC6Q8IVU3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HERC6Q8IVU3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.2■□□□□ 0.66
HERC6Q8IVU3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERC6Q8IVU3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERC6Q8IVU3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERC6Q8IVU3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HERC6Q8IVU3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.2■□□□□ 0.66
HERC6Q8IVU3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.19■□□□□ 0.66
HERC6Q8IVU3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HERC6Q8IVU3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.19■□□□□ 0.66
HERC6Q8IVU3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.19■□□□□ 0.66
HERC6Q8IVU3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
HERC6Q8IVU3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
HERC6Q8IVU3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HERC6Q8IVU3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.19■□□□□ 0.66
HERC6Q8IVU3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HERC6Q8IVU3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.19■□□□□ 0.66
HERC6Q8IVU3 ELK2BP-201ENST00000415014 1224 ntBASIC19.19■□□□□ 0.66
HERC6Q8IVU3 AC096633.1-201ENST00000422446 749 ntBASIC19.19■□□□□ 0.66
HERC6Q8IVU3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.19■□□□□ 0.66
HERC6Q8IVU3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms