Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 PNMA6B-201ENST00000538162 1200 ntBASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 AL121832.2-201ENST00000610979 668 ntBASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 LINC02228-204ENST00000642115 2962 ntBASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD2Q8IV50 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 AC104640.1-201ENST00000562617 2109 ntBASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 OR6D1P-203ENST00000641209 4860 ntBASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 POU5F1P3-201ENST00000428824 1078 ntBASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD2Q8IV50 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
LYSMD2Q8IV50 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 CDCA4P2-201ENST00000441182 718 ntBASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 KRT8P3-201ENST00000519669 1449 ntBASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 KLF2-202ENST00000592003 564 ntTSL 3 BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 AC080038.1-201ENST00000611274 1154 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms