Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
VRK2Q86Y07 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.5■□□□□ 0.23
VRK2Q86Y07 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VRK2Q86Y07 AC133963.1-201ENST00000504166 1679 ntBASIC16.5■□□□□ 0.23
VRK2Q86Y07 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VRK2Q86Y07 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
VRK2Q86Y07 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VRK2Q86Y07 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
VRK2Q86Y07 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
VRK2Q86Y07 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.49■□□□□ 0.23
VRK2Q86Y07 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.49■□□□□ 0.23
VRK2Q86Y07 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VRK2Q86Y07 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
VRK2Q86Y07 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
VRK2Q86Y07 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VRK2Q86Y07 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VRK2Q86Y07 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
VRK2Q86Y07 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VRK2Q86Y07 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
VRK2Q86Y07 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VRK2Q86Y07 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VRK2Q86Y07 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VRK2Q86Y07 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VRK2Q86Y07 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VRK2Q86Y07 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
VRK2Q86Y07 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.49■□□□□ 0.23
VRK2Q86Y07 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VRK2Q86Y07 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VRK2Q86Y07 TSPY5P-201ENST00000426936 936 ntBASIC16.49■□□□□ 0.23
VRK2Q86Y07 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VRK2Q86Y07 AL359075.1-203ENST00000462729 1002 ntBASIC16.49■□□□□ 0.23
VRK2Q86Y07 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.49■□□□□ 0.23
VRK2Q86Y07 LINC00304-203ENST00000565008 1864 ntBASIC16.49■□□□□ 0.23
VRK2Q86Y07 AC116407.2-201ENST00000613639 860 ntBASIC16.49■□□□□ 0.23
VRK2Q86Y07 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
VRK2Q86Y07 AC006011.2-201ENST00000621313 1158 ntBASIC16.49■□□□□ 0.23
VRK2Q86Y07 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VRK2Q86Y07 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.49■□□□□ 0.23
VRK2Q86Y07 PKD1P1-201ENST00000458669 6805 ntBASIC16.49■□□□□ 0.23
VRK2Q86Y07 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VRK2Q86Y07 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
VRK2Q86Y07 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VRK2Q86Y07 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VRK2Q86Y07 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VRK2Q86Y07 AC020916.1-201ENST00000587762 1774 ntBASIC16.49■□□□□ 0.23
VRK2Q86Y07 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.49■□□□□ 0.23
VRK2Q86Y07 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VRK2Q86Y07 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VRK2Q86Y07 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
VRK2Q86Y07 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
VRK2Q86Y07 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.48■□□□□ 0.23
VRK2Q86Y07 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VRK2Q86Y07 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
VRK2Q86Y07 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.48■□□□□ 0.23
VRK2Q86Y07 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VRK2Q86Y07 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VRK2Q86Y07 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VRK2Q86Y07 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
VRK2Q86Y07 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
VRK2Q86Y07 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VRK2Q86Y07 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.48■□□□□ 0.23
VRK2Q86Y07 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.48■□□□□ 0.23
VRK2Q86Y07 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.48■□□□□ 0.23
VRK2Q86Y07 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VRK2Q86Y07 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
VRK2Q86Y07 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VRK2Q86Y07 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
VRK2Q86Y07 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
VRK2Q86Y07 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
VRK2Q86Y07 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VRK2Q86Y07 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
VRK2Q86Y07 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.48■□□□□ 0.23
VRK2Q86Y07 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VRK2Q86Y07 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VRK2Q86Y07 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VRK2Q86Y07 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
VRK2Q86Y07 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.47■□□□□ 0.23
VRK2Q86Y07 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.47■□□□□ 0.23
VRK2Q86Y07 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.47■□□□□ 0.23
VRK2Q86Y07 REXO1L11P-201ENST00000620964 1927 ntBASIC16.47■□□□□ 0.23
VRK2Q86Y07 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
VRK2Q86Y07 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VRK2Q86Y07 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
VRK2Q86Y07 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
VRK2Q86Y07 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
VRK2Q86Y07 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VRK2Q86Y07 RNF152P1-201ENST00000397754 604 ntBASIC16.47■□□□□ 0.23
VRK2Q86Y07 AK4P3-201ENST00000418260 669 ntBASIC16.47■□□□□ 0.23
VRK2Q86Y07 TSPY12P-201ENST00000421279 868 ntBASIC16.47■□□□□ 0.23
VRK2Q86Y07 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
VRK2Q86Y07 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.47■□□□□ 0.23
VRK2Q86Y07 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VRK2Q86Y07 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.47■□□□□ 0.23
VRK2Q86Y07 AP003733.1-201ENST00000491725 852 ntBASIC16.47■□□□□ 0.23
VRK2Q86Y07 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.47■□□□□ 0.23
VRK2Q86Y07 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.47■□□□□ 0.23
VRK2Q86Y07 ZNF444P1-201ENST00000559497 298 ntBASIC16.47■□□□□ 0.23
VRK2Q86Y07 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.47■□□□□ 0.23
VRK2Q86Y07 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VRK2Q86Y07 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms