Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRC28Q86X40 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC28Q86X40 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRC28Q86X40 TMPOP1-202ENST00000424642 1267 ntBASIC15.89■□□□□ 0.13
LRRC28Q86X40 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.89■□□□□ 0.13
LRRC28Q86X40 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.89■□□□□ 0.13
LRRC28Q86X40 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC28Q86X40 ATP5G1P1-201ENST00000448724 379 ntBASIC15.89■□□□□ 0.13
LRRC28Q86X40 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.89■□□□□ 0.13
LRRC28Q86X40 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
LRRC28Q86X40 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LRRC28Q86X40 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC28Q86X40 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRC28Q86X40 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.89■□□□□ 0.13
LRRC28Q86X40 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
LRRC28Q86X40 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC28Q86X40 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC28Q86X40 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
LRRC28Q86X40 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC28Q86X40 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC28Q86X40 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC28Q86X40 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.89■□□□□ 0.13
LRRC28Q86X40 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LRRC28Q86X40 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC28Q86X40 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC28Q86X40 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LRRC28Q86X40 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC28Q86X40 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRC28Q86X40 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC28Q86X40 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
LRRC28Q86X40 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC28Q86X40 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC28Q86X40 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC28Q86X40 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC28Q86X40 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
LRRC28Q86X40 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC28Q86X40 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC28Q86X40 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRC28Q86X40 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC28Q86X40 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC28Q86X40 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC28Q86X40 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LRRC28Q86X40 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.88■□□□□ 0.13
LRRC28Q86X40 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRC28Q86X40 AC010203.1-204ENST00000548782 407 ntBASIC15.88■□□□□ 0.13
LRRC28Q86X40 AL512604.3-201ENST00000569583 964 ntBASIC15.88■□□□□ 0.13
LRRC28Q86X40 RN7SL850P-201ENST00000579959 291 ntBASIC15.88■□□□□ 0.13
LRRC28Q86X40 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.88■□□□□ 0.13
LRRC28Q86X40 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.88■□□□□ 0.13
LRRC28Q86X40 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRC28Q86X40 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC28Q86X40 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.88■□□□□ 0.13
LRRC28Q86X40 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC28Q86X40 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LRRC28Q86X40 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.88■□□□□ 0.13
LRRC28Q86X40 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC28Q86X40 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LRRC28Q86X40 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.88■□□□□ 0.13
LRRC28Q86X40 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
LRRC28Q86X40 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
LRRC28Q86X40 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
LRRC28Q86X40 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC28Q86X40 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC28Q86X40 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRC28Q86X40 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC28Q86X40 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC28Q86X40 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC28Q86X40 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRC28Q86X40 AL138688.1-201ENST00000624851 1594 ntBASIC15.87■□□□□ 0.13
LRRC28Q86X40 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.87■□□□□ 0.13
LRRC28Q86X40 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
LRRC28Q86X40 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.87■□□□□ 0.13
LRRC28Q86X40 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRC28Q86X40 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRC28Q86X40 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRC28Q86X40 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRC28Q86X40 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.87■□□□□ 0.13
LRRC28Q86X40 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRC28Q86X40 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LRRC28Q86X40 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LRRC28Q86X40 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
LRRC28Q86X40 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRC28Q86X40 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRC28Q86X40 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.87■□□□□ 0.13
LRRC28Q86X40 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRC28Q86X40 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
LRRC28Q86X40 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.87■□□□□ 0.13
LRRC28Q86X40 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.87■□□□□ 0.13
LRRC28Q86X40 AP003041.3-201ENST00000527151 707 ntBASIC15.87■□□□□ 0.13
LRRC28Q86X40 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.87■□□□□ 0.13
LRRC28Q86X40 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.87■□□□□ 0.13
LRRC28Q86X40 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
LRRC28Q86X40 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.87■□□□□ 0.13
LRRC28Q86X40 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LRRC28Q86X40 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRC28Q86X40 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
LRRC28Q86X40 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
LRRC28Q86X40 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRC28Q86X40 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRC28Q86X40 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms