Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PACS2Q86VP3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PACS2Q86VP3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PACS2Q86VP3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PACS2Q86VP3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PACS2Q86VP3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PACS2Q86VP3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PACS2Q86VP3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PACS2Q86VP3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PACS2Q86VP3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.97■□□□□ 0.47
PACS2Q86VP3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
PACS2Q86VP3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.96■□□□□ 0.47
PACS2Q86VP3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PACS2Q86VP3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PACS2Q86VP3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.96■□□□□ 0.47
PACS2Q86VP3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PACS2Q86VP3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.96■□□□□ 0.47
PACS2Q86VP3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.96■□□□□ 0.47
PACS2Q86VP3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PACS2Q86VP3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PACS2Q86VP3 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PACS2Q86VP3 AL353807.1-201ENST00000427475 662 ntBASIC17.96■□□□□ 0.47
PACS2Q86VP3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PACS2Q86VP3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.96■□□□□ 0.47
PACS2Q86VP3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.96■□□□□ 0.47
PACS2Q86VP3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.96■□□□□ 0.47
PACS2Q86VP3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.96■□□□□ 0.47
PACS2Q86VP3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.96■□□□□ 0.47
PACS2Q86VP3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PACS2Q86VP3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PACS2Q86VP3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.96■□□□□ 0.47
PACS2Q86VP3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PACS2Q86VP3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.96■□□□□ 0.47
PACS2Q86VP3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PACS2Q86VP3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PACS2Q86VP3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PACS2Q86VP3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PACS2Q86VP3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.96■□□□□ 0.46
PACS2Q86VP3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.96■□□□□ 0.46
PACS2Q86VP3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PACS2Q86VP3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PACS2Q86VP3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PACS2Q86VP3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PACS2Q86VP3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.95■□□□□ 0.46
PACS2Q86VP3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.95■□□□□ 0.46
PACS2Q86VP3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
PACS2Q86VP3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.95■□□□□ 0.46
PACS2Q86VP3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PACS2Q86VP3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PACS2Q86VP3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PACS2Q86VP3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.95■□□□□ 0.46
PACS2Q86VP3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PACS2Q86VP3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.95■□□□□ 0.46
PACS2Q86VP3 AC012618.2-201ENST00000428058 849 ntBASIC17.95■□□□□ 0.46
PACS2Q86VP3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.95■□□□□ 0.46
PACS2Q86VP3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PACS2Q86VP3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.95■□□□□ 0.46
PACS2Q86VP3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PACS2Q86VP3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PACS2Q86VP3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.95■□□□□ 0.46
PACS2Q86VP3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PACS2Q86VP3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PACS2Q86VP3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PACS2Q86VP3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PACS2Q86VP3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PACS2Q86VP3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PACS2Q86VP3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PACS2Q86VP3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PACS2Q86VP3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PACS2Q86VP3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PACS2Q86VP3 OR6D1P-202ENST00000641007 5290 ntBASIC17.94■□□□□ 0.46
PACS2Q86VP3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.94■□□□□ 0.46
PACS2Q86VP3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.94■□□□□ 0.46
PACS2Q86VP3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PACS2Q86VP3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PACS2Q86VP3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PACS2Q86VP3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PACS2Q86VP3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PACS2Q86VP3 RPS2P55-201ENST00000397318 883 ntBASIC17.94■□□□□ 0.46
PACS2Q86VP3 MTATP6P19-201ENST00000413797 659 ntBASIC17.94■□□□□ 0.46
PACS2Q86VP3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PACS2Q86VP3 AC107956.1-201ENST00000494359 873 ntBASIC17.94■□□□□ 0.46
PACS2Q86VP3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.94■□□□□ 0.46
PACS2Q86VP3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.94■□□□□ 0.46
PACS2Q86VP3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PACS2Q86VP3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.94■□□□□ 0.46
PACS2Q86VP3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PACS2Q86VP3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PACS2Q86VP3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PACS2Q86VP3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
PACS2Q86VP3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PACS2Q86VP3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PACS2Q86VP3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PACS2Q86VP3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.94■□□□□ 0.46
PACS2Q86VP3 HTR7P1-201ENST00000538670 1336 ntBASIC17.94■□□□□ 0.46
PACS2Q86VP3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PACS2Q86VP3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PACS2Q86VP3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.94■□□□□ 0.46
PACS2Q86VP3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PACS2Q86VP3 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms